RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 DNMT1P26358 1616 aaKnown RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 GXYLT2A0PJZ3 443 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 EDF1O60869 148 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 C6orf47O95873 294 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 NDUFV2P19404 249 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PRPS1L1P21108 318 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 BMP6P22004 513 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 GGT5P36269 586 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 HEPHL1Q6MZM0 1159 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 C6orf120Q7Z4R8 191 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SLC2A12Q8TD20 617 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PRDM9Q9NQV7 894 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TXNL1O43396 289 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PTAFRP25105 342 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 ADRA1BP35368 520 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 OAZ1P54368 228 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 KLHDC10Q6PID8 442 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 THOC6Q86W42 341 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 GLB1L3Q8NCI6 653 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 RAB27BO00194 218 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 GCH1P30793 250 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TAS2R43P59537 309 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SCAPQ12770 1279 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 FBXW12Q6X9E4 464 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PLD4Q96BZ4 506 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 GLSO94925 669 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SPDEFO95238 335 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CD9P21926 228 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 NDUFS1P28331 727 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CSNK2A1P68400 391 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CDK6Q00534 326 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PTPRRQ15256 657 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 C9orf152Q5JTZ5 239 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CDHR3Q6ZTQ4 885 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CNEP1R1Q8N9A8 125 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CSNK2A3Q8NEV1 391 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 OR2AP1Q8NGE2 309 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 BBS10Q8TAM1 723 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 FAM84AQ96KN4 292 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CCM2Q9BSQ5 444 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SLC19A2O60779 497 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CSTAP01040 98 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PNMTP11086 282 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 ASRGL1Q7L266 308 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PRELID2Q8N945 189 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TMBIM1Q969X1 311 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 FAM122AQ96E09 287 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 CHRNB1P11230 501 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 ERVK-8P63133 956 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 NOGQ13253 232 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM119Q4V9L6 283 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 GTPBP8Q8N3Z3 284 aaPredicted RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TXNDC15Q96J42 360 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 DPEP3Q9H4B8 488 aa13.69□□□□□ -0.22
HIPK3-201ENST00000303296 TESQ9UGI8 421 aaKnown RBP13.69□□□□□ -0.22
HIPK3-201ENST00000303296 MAFO75444 373 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 ARRB1P49407 418 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 EPHA4P54764 986 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 ACY1Q03154 408 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 VSX1Q9NZR4 365 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 KLHL9Q9P2J3 617 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 SLC16A5O15375 505 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 CAPN5O15484 640 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 TIMP2P16035 220 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 CELP19835 753 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 ANXA7P20073 488 aaKnown RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 CLCN2P51788 898 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 CHRNA6Q15825 494 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 STEAP4Q687X5 459 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 RAB8BQ92930 207 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 LRIG1Q96JA1 1093 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-201ENST00000303296 OXSMQ9NWU1 459 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 HSPB6O14558 160 aa13.68□□□□□ -0.22
HIPK3-201ENST00000303296 TERTO14746 1132 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms