RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 C17orf62Q9BQA9 187 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 OXSMQ9NWU1 459 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 LOC730098B7Z3J9 87 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 C4BPAP04003 597 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PRKCAP17252 672 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ITGB5P18084 799 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CD34P28906 385 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CD79BP40259 229 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DNAJA3Q96EY1 480 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RBCK1Q9BYM8 510 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PLAGL1Q9UM63 463 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM14AQ9Y6G1 99 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 EDDM13A0A1B0GTR0 161 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 MYBPHLA2RUH7 354 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CASC3O15234 703 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 SULT1B1O43704 296 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 FMO6PO60774 539 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 NUDT7P0C024 238 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 IL7P13232 177 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 EPHA1P21709 976 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 MAP2K3P46734 347 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RABGGTBP53611 331 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DLX2Q07687 328 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ABHD18Q0P651 414 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 FADDQ13158 208 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DYRK1AQ13627 763 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 REEP3Q6NUK4 255 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 LYSMD3Q7Z3D4 306 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 TSPAN33Q86UF1 283 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 GPR137CQ8N3F9 429 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 GTPBP8Q8N3Z3 284 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DTX3Q8N9I9 347 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 OR4F6Q8NGB9 312 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 C10orf82Q8WW14 230 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 SDSLQ96GA7 329 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF681Q96N22 645 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ATXN7L1Q9ULK2 861 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF536O15090 1300 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 A8MT66 165 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 INPPL1O15357 1258 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 MMP20O60882 483 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CSTAP01040 98 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ADORA3P0DMS8 318 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 XRCC1P18887 633 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PRRT3Q5FWE3 981 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RNASE10Q5GAN6 216 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 GOLGA7Q7Z5G4 137 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 OR9K2Q8NGE7 335 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 AURKBQ96GD4 344 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 SAMD11Q96NU1 681 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 FCRL5Q96RD9 977 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 HSD17B14Q9BPX1 270 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 B3GNT2Q9NY97 397 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 NCDNQ9UBB6 729 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CASZ1Q86V15 1759 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RICTORQ6R327 1708 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 GLOD5A6NK44 160 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PCDH17O14917 1159 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 OR2B3O76000 313 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 HNRNPH3P31942 346 aaKnown RBP9.98□□□□□ -0.81
CLIP1-201ENST00000302528 CAV2P51636 162 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 UFM1P61960 85 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 TRMT10BQ6PF06 316 aaKnown RBP9.98□□□□□ -0.81
CLIP1-201ENST00000302528 Q8N402 240 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF610Q8N9Z0 462 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 OR4K14Q8NGD5 310 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 OR10T2Q8NGX3 314 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 MAPK15Q8TD08 544 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PITX2Q99697 317 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 SRA1Q9HD15 236 aaKnown RBP9.98□□□□□ -0.81
CLIP1-201ENST00000302528 GALPQ9UBC7 116 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 FAM198AQ9UFP1 575 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 UNC119BA6NIH7 251 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 ABCB7O75027 752 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 SPATA31C1P0DKV0 1188 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 GGT5P36269 586 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PREPP48147 710 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 RPS24P62847 133 aaKnown RBP9.98□□□□□ -0.81
CLIP1-201ENST00000302528 GPM6BQ13491 265 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM236Q5W0B7 351 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PXKQ7Z7A4 578 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM151AQ8N4L1 468 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 OR2T33Q8NG76 320 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 OR5H2Q8NGV7 314 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 BIRC7Q96CA5 298 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 RPF2Q9H7B2 306 aaKnown RBP9.98□□□□□ -0.81
CLIP1-201ENST00000302528 KLHL13Q9P2N7 655 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 ASB3Q9Y575 518 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 F8W036 122 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 TNFSF12O43508 249 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 HK3P52790 923 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 LILRA4P59901 499 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 BLOC1S1P78537 153 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PLCXD2Q0VAA5 305 aa9.98□□□□□ -0.81
CLIP1-201ENST00000302528 PTP4A2Q12974 167 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms