RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 ABRAXAS2Q15018 415 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SIRPB2Q5JXA9 342 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NKAPLQ5M9Q1 402 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 DCAF12L1Q5VU92 463 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NCBP2-AS2Q69YL0 99 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 ABHD13Q7L211 337 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 THOC6Q86W42 341 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 PSD4Q8NDX1 1056 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 OR56A1Q8NGH5 318 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 OR6N2Q8NGY6 317 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SCAMP5Q8TAC9 235 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 RAB8BQ92930 207 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 WDR45Q9Y484 360 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 AGTR1P30556 359 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 HCAR3P49019 387 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SLC26A5P58743 744 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 PCLAFQ15004 111 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 ATP6AP1Q15904 470 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 CHRFAM7AQ494W8 412 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 MSS51Q4VC12 460 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 C10orf62Q5T681 223 aaPredicted RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 C22orf42Q6IC83 251 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 RNF130Q86XS8 419 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 CLDN19Q8N6F1 224 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 ASB15Q8WXK1 588 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SLC45A3Q96JT2 553 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 FOLH1BQ9HBA9 442 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 CACNG4Q9UBN1 327 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 TEX264Q9Y6I9 313 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 A0A1B0GV50 99 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 FUCA1P04066 466 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 C8orf89P0DMQ9 161 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 S1PR1P21453 382 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 RAB8AP61006 207 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SP2Q02086 613 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 FADDQ13158 208 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SOWAHAQ2M3V2 549 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SLC10A6Q3KNW5 377 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 ELP2Q6IA86 826 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NANOGP8Q6NSW7 305 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 GLIS1Q8NBF1 620 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 OR6Q1Q8NGQ2 317 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SMPDL3AQ92484 453 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NINJ1Q92982 152 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 SECISBP2Q96T21 854 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NSUN3Q9H649 340 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 NANOGQ9H9S0 305 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 ZNF701Q9NV72 531 aaPredicted RBP10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 COQ4Q9Y3A0 265 aa10.33□□□□□ -0.76
PKNOX1-201ENST00000291547 IFNA1P01562 189 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 MMP3P08254 477 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 DLDP09622 509 aaKnown RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CAPZA1P52907 286 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 DIO3P55073 304 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CRHR2Q13324 411 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 FGFBP1Q14512 234 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 LHFPL3Q86UP9 236 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 ZSWIM9Q86XI8 627 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 HYLS1Q96M11 299 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CCDC106Q9BWC9 280 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 ATG5Q9H1Y0 275 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 NLKQ9UBE8 527 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 RNF11Q9Y3C5 154 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 H3BMQ9 156 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 SYN3O14994 580 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 MUSKO15146 869 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 GRIA2P42262 883 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 MFSD13AQ14CX5 517 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 SLC27A4Q6P1M0 643 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 FTMTQ8N4E7 242 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 COG8Q96MW5 612 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 ADAMTS10Q9H324 1103 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CARS2Q9HA77 564 aaKnown RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 AJAP1Q9UKB5 411 aaPredicted RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 MAGED1Q9Y5V3 778 aaPredicted RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 HMX3A6NHT5 357 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 LATS1O95835 1130 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 IFNA4P05014 189 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 RORAP35398 523 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CSKP41240 450 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CLCNKAP51800 687 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 HK3P52790 923 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 GAD2Q05329 585 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 CARD16Q5EG05 197 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 FIP1L1Q6UN15 594 aaKnown RBP10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 TMIGD1Q6UXZ0 262 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 LINC00299Q6ZSB3 139 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 TMPRSS12Q86WS5 348 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 GID4Q8IVV7 300 aa10.32□□□□□ -0.76
PKNOX1-201ENST00000291547 LAS2Q8IYD9 372 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms