RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LYRM4Q9HD34 91 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ADAP2Q9NPF8 381 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 NDE1Q9NXR1 346 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CCT8L1PA6NM43 557 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ATP5HO75947 161 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ETHE1O95571 254 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ONECUT2O95948 504 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 UQCRBP14927 111 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 GPX3P22352 226 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 BUD31P41223 144 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 NHLH1Q02575 133 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF763Q0D2J5 394 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF574Q6ZN55 896 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CLNKQ7Z7G1 428 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 MTDHQ86UE4 582 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 FBXO30Q8TB52 745 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 APIPQ96GX9 242 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 LIN37Q96GY3 246 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF354BQ96LW1 612 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 SIDT1Q9NXL6 827 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 POLR3HQ9Y535 204 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 PCM1Q15154 2024 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 A6NL46 340 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 B4E171 279 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 PLPP1O14494 284 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ANKRD28O15084 1053 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 PEX1O43933 1283 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 REM1O75628 298 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 TIPRLO75663 272 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 HBQ1P09105 142 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 SDHBP21912 280 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 TSPAN7P41732 249 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ATP12AP54707 1039 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ARSFP54793 590 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CLDN8P56748 225 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 COMMD6Q7Z4G1 85 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 UBE3DQ7Z6J8 389 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 POU5F2Q8N7G0 328 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF555Q8NEP9 628 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 RP9Q8TA86 221 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ATAD3AQ9NVI7 634 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF780BQ9Y6R6 833 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM234BA2RU67 622 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 H0YIG0 161 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PCDH7O60245 1069 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 SMNDC1O75940 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 IFI6P09912 130 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 AGXTP21549 392 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PAICSP22234 425 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 HPCAL1P37235 193 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 MTTPP55157 894 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ITGA1P56199 1179 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 HMGCS1Q01581 520 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 EIF3IQ13347 325 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 RIN1Q13671 783 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PDE7AQ13946 482 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 MRM1Q6IN84 353 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 EXOSC8Q96B26 276 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 NUDT22Q9BRQ3 303 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 C1orf50Q9BV19 199 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 NMUR2Q9GZQ4 415 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 AICDAQ9GZX7 198 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 CLMPQ9H6B4 373 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ARHGEF17Q96PE2 2063 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 TRIOO75962 3097 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ZFHX2Q9C0A1 2572 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 GNB5O14775 395 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 P2RX6O15547 441 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 CYC1P08574 325 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 BCKDHAP12694 445 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 DRD2P14416 443 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PVRP15151 417 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 SDC1P18827 310 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PRPS1L1P21108 318 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PDX1P52945 283 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 IL11RAQ14626 422 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 GRM7Q14831 915 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 FRMPD2BQ6IN97 320 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ADNP2Q6IQ32 1131 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 CYP4Z1Q86W10 505 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 RIMKLAQ8IXN7 391 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 CADM2Q8N3J6 435 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 LIX1Q8N485 282 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 C1orf52Q8N6N3 182 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 SMYD1Q8NB12 490 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PROX1Q92786 737 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 CMTM5Q96DZ9 223 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 ZPBPQ9BS86 351 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 STRADBQ9C0K7 418 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 LHX9Q9NQ69 397 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM86C1Q9NVL1 165 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 STOML1Q9UBI4 398 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 PHF11Q9UIL8 331 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 TDRD6O60522 2096 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 B4GALT2O60909 372 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 INMTO95050 263 aa7.98□□□□□ -1.13
PTPDC1-201ENST00000288976 FGF5P12034 268 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms