RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TEX26Q8N6G2 289 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 MMP28Q9H239 520 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 FAM120CQ9NX05 1096 aaKnown RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 FBXL3Q9UKT7 428 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PCDHGB6Q9Y5F9 930 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ANXA2P2A6NMY6 339 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ADH1CP00326 375 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PRNPP04156 253 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ANXA2P07355 339 aaKnown RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 VIPR1P32241 457 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 SKP1P63208 163 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 GRASPQ7Z6J2 395 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ZCCHC10Q8TBK6 192 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 WBP2Q969T9 261 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PMEPA1Q969W9 287 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF583Q96ND8 569 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 CST11Q9H112 138 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 IL36AQ9UHA7 158 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 OR7A17O14581 309 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 ADAMTS4O75173 837 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 PTX3P26022 381 aaPredicted RBP12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 TLX1P31314 330 aaPredicted RBP12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 CLCNKAP51800 687 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 PRAMEF14Q5SWL7 426 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 C10orf62Q5T681 223 aaPredicted RBP12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 PRAMEF13Q5VWM6 474 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 DCP2Q8IU60 420 aaKnown RBP12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 POGLUT1Q8NBL1 392 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 TMIEQ8NEW7 156 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 OR5H6Q8NGV6 325 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 HUS1BQ8NHY5 278 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 WFDC5Q8TCV5 224 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 RNF31Q96EP0 1072 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF354BQ96LW1 612 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF350Q9GZX5 532 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 TRPV4Q9HBA0 871 aa12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 RBM7Q9Y580 266 aaKnown RBP12.02□□□□□ -0.48
SLC6A1-201ENST00000287766 H3BSH0 61 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 PI15O43692 258 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 SOCS5O75159 536 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 APOC1P02654 83 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 CBSLP0DN79 551 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 SRCP12931 536 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 CBSP35520 551 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 AVPR1BP47901 424 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 ARHGDIBP52566 201 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 NTHL1P78549 312 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 NPRL3Q12980 569 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 POMZP3Q6PJE2 187 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 TMIGD1Q6UXZ0 262 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 IQCHQ86VS3 1027 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 AMZ2Q86W34 360 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 P2RY13Q9BPV8 354 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 NECTIN3Q9NQS3 549 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 UTS2RQ9UKP6 389 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 H7BY64 318 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 FGF18O76093 207 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 PTTG1O95997 202 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF14P17017 642 aaPredicted RBP12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 PTGER1P34995 402 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 DSC1Q08554 894 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 CCDC58Q4VC31 144 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 NAGSQ8N159 534 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 OR6K6Q8NGW6 343 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 OR14C36Q8NHC7 312 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 NDNFQ8TB73 568 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 PIGXQ8TBF5 258 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 DOK4Q8TEW6 326 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 SGCDQ92629 289 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 PRAP1Q96NZ9 151 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 CLSTN3Q9BQT9 956 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 FBXO10Q9UK96 956 aa12.02□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF705EA8MWA4 302 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 IGLV3-25P01717 112 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ACADMP11310 421 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 HK1P19367 917 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 PVALBP20472 110 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GSTM2P28161 218 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ARF3P61204 181 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ARF1P84077 181 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CDK5R2Q13319 367 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 UGT3A2Q3SY77 523 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SCGB2B2Q4G0G5 96 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 HLA-DQA1Q5Y7H0 255 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ANKRD54Q6NXT1 300 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 TFGQ92734 400 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ZSWIM3Q96MP5 696 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CASD1Q96PB1 797 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 MKRN2Q9H000 416 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms