RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 DCST1Q5T197 706 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 GDPGP1Q6ZNW5 385 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TMC8Q8IU68 726 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 GPR65Q8IYL9 337 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 CFAP206Q8IYR0 622 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC39A11Q8N1S5 342 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 LILRB4Q8NHJ6 448 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 MTERF3Q96E29 417 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SNX18Q96RF0 628 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 CMAHPQ9Y471 501 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 COL4A6Q14031 1691 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 CKAP5Q14008 2032 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 CXorf51AA0A1B0GTR3 108 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 HYKKA2RU49 373 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 WASH3PC4AMC7 463 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TEX28O15482 410 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TPST2O60704 377 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 DGKGP49619 791 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 DAB2P98082 770 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 NCF4Q15080 339 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 C12orf73Q69YU5 71 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TCTN3Q6NUS6 607 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 ERAP2Q6P179 960 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 NXPE4Q6UWF7 544 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 IQCF1Q8N6M8 205 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 NANOGP1Q8N7R0 232 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 CYB5D2Q8WUJ1 264 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 RAB8BQ92930 207 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 AP2M1Q96CW1 435 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 NDEL1Q9GZM8 345 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 MMP28Q9H239 520 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 MGAT4BQ9UQ53 548 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 ANKDD1BA6NHY2 528 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 CDRT1O95170 752 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 CTSLP07711 333 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 CHRM5P08912 532 aaPredicted RBP12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 RACK1P63244 317 aaKnown RBP12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 SP3Q02447 781 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 SLAMF1Q13291 335 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 UNC5DQ6UXZ4 953 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 TECPR1Q7Z6L1 1165 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 PHC2Q8IXK0 858 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 WDFY2Q96P53 400 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 WFDC6Q9BQY6 131 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 RERGLQ9H628 205 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 SLAMF7Q9NQ25 335 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 NDOR1Q9UHB4 597 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 ITM2BQ9Y287 266 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 LRRK1Q38SD2 2015 aa12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.39
SLC28A1-201ENST00000286749 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ANKRD34BA5PLL1 514 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 CENPXA8MT69 81 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 HEPACAM2A8MVW5 462 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 PLD2O14939 933 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 MYL12BO14950 172 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 SH3BP5O60239 455 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 H1F0P07305 194 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 DDOSTP39656 456 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 MAPK9P45984 424 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TAP2Q03519 686 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 MFSD4BQ5TF39 518 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 PGBD2Q6P3X8 592 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ADIPOR2Q86V24 386 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ASCC1Q8N9N2 400 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 OR4D11Q8NGI4 311 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ABCG4Q9H172 646 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 RMI1Q9H9A7 625 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ABCB9Q9NP78 766 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 KLHL20Q9Y2M5 609 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 AGRPO00253 132 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 FAAHO00519 579 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 CLEC2LP0C7M8 214 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 ELFN1P0C7U0 828 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TNNI3P19429 210 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms