RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 MYOFQ9NZM1 2061 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CHURC1-FNTBB4DL54 471 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 MPZL2O60487 215 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ALOX5P09917 674 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 VLDLRP98155 873 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 PIN1Q13526 163 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 IL18Q14116 193 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM107Q6UX40 140 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TMEFF1Q8IYR6 380 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FBXO15Q8NCQ5 510 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 DEPDC7Q96QD5 511 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CCDC182A6NF36 153 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 NDUFB5O43674 189 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 GTF2E2P29084 291 aaKnown RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 CLCA4Q14CN2 919 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SLC5A12Q1EHB4 618 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TPRG1LQ5T0D9 272 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 IZUMO1Q8IYV9 350 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 CENPSQ8N2Z9 138 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TTLQ8NG68 377 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 FCGR1BQ92637 280 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 DNAJA3Q96EY1 480 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 EHD1Q9H4M9 534 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 MKLN1Q9UL63 735 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 WDR45Q9Y484 360 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 CCNKO75909 580 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TSPAN12O95859 305 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 HIST1H2ABP04908 130 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SRPRAP08240 638 aaKnown RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 UQCRC2P22695 453 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 IMPA1P29218 277 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 PIK3CBP42338 1070 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SIM1P81133 766 aaPredicted RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 IL18R1Q13478 541 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 PRRT3Q5FWE3 981 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TSSK4Q6SA08 328 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 HIST3H2AQ7L7L0 130 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 FAM217AQ8IXS0 508 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 OR5D16Q8NGK9 328 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 HIST1H2ACQ93077 130 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SLC6A16Q9GZN6 736 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM165Q9HC07 324 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 CUEDC1Q9NWM3 386 aaPredicted RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 WBP11Q9Y2W2 641 aaKnown RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 TAF4O00268 1085 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 ACOX3O15254 700 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 VEGFDO43915 354 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 STX11O75558 287 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 ALPLP05186 524 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 CDK4P11802 303 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 C21orf33P30042 268 aaPredicted RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF404Q494X3 552 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 WDR53Q7Z5U6 358 aaPredicted RBP13.68□□□□□ -0.22
TMEM47-201ENST00000275954 LUZP2Q86TE4 346 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 ABCA7Q8IZY2 2146 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SPARTQ8N0X7 666 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF563Q8TA94 476 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 OR5P2Q8WZ92 322 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 UBE2FQ969M7 185 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 OSBPL10Q9BXB5 764 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 OR51I1Q9H343 314 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 STMN3Q9NZ72 180 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 SNX7Q9UNH6 387 aa13.68□□□□□ -0.22
TMEM47-201ENST00000275954 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 CENPXA8MT69 81 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 EIF3FO00303 357 aaPredicted RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 HPRP00739 348 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 HOXC8P31273 242 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 FADDQ13158 208 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 EIF4HQ15056 248 aaKnown RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 XKR7Q5GH72 579 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 DLEU7Q6UYE1 221 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 RTL4Q6ZR62 310 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 SLC22A16Q86VW1 577 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 METTL27Q8N6F8 245 aaPredicted RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 IQCF1Q8N6M8 205 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 Q8N9G6 341 aaPredicted RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF675Q8TD23 568 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 PMEPA1Q969W9 287 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 PIP5K1AQ99755 562 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 IL37Q9NZH6 218 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF225Q9UK10 706 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 ACSL5Q9ULC5 683 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 K7ESM1 405 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 M0R3H8 397 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 VILLO15195 856 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 TMBIM6P55061 237 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 MVKQ03426 396 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
TMEM47-201ENST00000275954 FAM92BQ6ZTR7 304 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 NEK10Q6ZWH5 1172 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 USP53Q70EK8 1073 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 ZSWIM9Q86XI8 627 aa13.67□□□□□ -0.22
TMEM47-201ENST00000275954 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms