RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 VAMP1P23763 118 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 PGM5Q15124 567 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 DPYSL2Q16555 572 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 SEZ6Q53EL9 994 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 CELF3Q5SZQ8 465 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 OR6B2Q6IFH4 312 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ZNF730Q6ZMV8 503 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 CATSPERGQ6ZRH7 1159 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 CHST14Q8NCH0 376 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 GPR150Q8NGU9 434 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 KCNJ9Q92806 393 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ZNF707Q96C28 371 aaPredicted RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 ZBTB45Q96K62 511 aaPredicted RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 TMEM209Q96SK2 561 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 TCEAL7Q9BRU2 100 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 GABARAPL3Q9BY60 117 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 GSDMCQ9BYG8 508 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ABCG5Q9H222 651 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 LHX6Q9UPM6 363 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 NPTNQ9Y639 398 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 KPNA3O00505 521 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 MED7O43513 233 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ICOSLGO75144 302 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 S1PR4O95977 384 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PEX11BO96011 259 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PAK4O96013 591 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 ALPIP09923 528 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 MST1P26927 711 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PPP3R1P63098 170 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 DCDP81605 110 aaKnown RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 RBBP4Q09028 425 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 HABP2Q14520 560 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 HLXQ14774 488 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 DHRS7BQ6IAN0 325 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 C22orf42Q6IC83 251 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 METAP1DQ6UB28 335 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 MILR1Q7Z6M3 343 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 DPPA2Q7Z7J5 298 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ISCA2Q86U28 154 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SERPINA12Q8IW75 414 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CNTN4Q8IWV2 1026 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PHACTR4Q8IZ21 702 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ARRDC1Q8N5I2 433 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SNX33Q8WV41 574 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ART5Q96L15 291 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 YIPF4Q9BSR8 244 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 KATNB1Q9BVA0 655 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 GKN1Q9NS71 199 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 IRAK3Q9Y616 596 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 DOCK1Q14185 1865 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SYNJ2BP-COX16A0A087WUM0 186 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 C9orf170A2RU37 121 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 DISC1C4P0D8 188 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ADAMDEC1O15204 470 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 MFSD11O43934 449 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PEX10O60683 326 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 STBD1O95210 358 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CBSLP0DN79 551 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 GOT1P17174 413 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CBSP35520 551 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CD79BP40259 229 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SLC1A2P43004 574 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 JAK3P52333 1124 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 EPHA4P54764 986 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 ZNF33AQ06730 810 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 UGCGQ16739 394 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 UAP1L1Q3KQV9 507 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 B3GNTL1Q67FW5 361 aaPredicted RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 KCTD11Q693B1 232 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 C10orf111Q8N326 155 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 HSD17B8Q92506 261 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 TADA1Q96BN2 335 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 KLRG1Q96E93 195 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 FBXO17Q96EF6 278 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 POM121Q96HA1 1249 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 TSNAXQ99598 290 aaKnown RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 PDCD2LQ9BRP1 358 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SOX7Q9BT81 388 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 HDHD2Q9H0R4 259 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 C11orf16Q9NQ32 467 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CRTAC1Q9NQ79 661 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 PXMP2Q9NR77 195 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 RNF146Q9NTX7 359 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CLEC2DQ9UHP7 191 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 CLEC4AQ9UMR7 237 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 SLC9A8Q9Y2E8 581 aa8.8□□□□□ -1
PDGFC-201ENST00000274071 POLR2AP24928 1970 aaKnown RBP8.8□□□□□ -1
PDGFC-201ENST00000274071 WASH3PC4AMC7 463 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 E9PI62 339 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SOCS7O14512 581 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TREHO43280 583 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR1I1O60431 355 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 LILRB5O75023 590 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SOX30O94993 753 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ACLYP53396 1101 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 CAP1Q01518 475 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SMCO1Q147U7 214 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PPA1Q15181 289 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 C9orf131Q5VYM1 1079 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms