RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 MAL2Q969L2 176 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 C14orf119Q9NWQ9 140 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 RNF186Q9NXI6 227 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 TUBA8Q9NY65 449 aaPredicted RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 TRIM64A6NGJ6 449 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 PEPDP12955 493 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 BPIP17213 487 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 IL1RNP18510 177 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 TUBA1BP68363 451 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 TUBA4AP68366 448 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 GALK2Q01415 458 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ELAVL3Q14576 367 aaKnown RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 LRFN4Q6PJG9 635 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 TUBA1AQ71U36 451 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 UBE2Q1Q7Z7E8 422 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 OR5J2Q8NH18 312 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZDHHC12Q96GR4 267 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 EXTL2Q9UBQ6 330 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 NUP50Q9UKX7 468 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 TMEM5Q9Y2B1 443 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 CCRL2O00421 344 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 PTGESO14684 152 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ETFAP13804 333 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 TNFRSF1BP20333 461 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 IST1P53990 364 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 VTCN1Q7Z7D3 282 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 TMEM135Q86UB9 458 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 TMEM151AQ8N4L1 468 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 RHEBL1Q8TAI7 183 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 NEIL3Q8TAT5 605 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 GATAD2BQ8WXI9 593 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 C14orf166Q9Y224 244 aaKnown RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 HSPB11Q9Y547 144 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 FOSL2P15408 326 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 AK4P27144 223 aaPredicted RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 PYCR1P32322 319 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 GPR4P46093 362 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 FNTBP49356 437 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ATP4BP51164 291 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 SH3BP2P78314 561 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 CRYZQ08257 329 aaKnown RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 PLCXD2Q0VAA5 305 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 DEFB110Q30KQ9 67 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 TUBA3EQ6PEY2 450 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ZSWIM9Q86XI8 627 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 SYNPOQ8N3V7 929 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 CSNK1A1LQ8N752 337 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 OR8J3Q8NGG0 315 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 OR52P1PQ8NH57 321 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 WDR20Q8TBZ3 569 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 BORCS8Q96FH0 119 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 DEFB126Q9BYW3 111 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 PFKMP08237 780 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 GCGRP47871 477 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ATP6AP1Q15904 470 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ATG9BQ674R7 924 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 LSM14AQ8ND56 463 aaKnown RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 OR2T33Q8NG76 320 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 BBS10Q8TAM1 723 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 PIP5K1AQ99755 562 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 HERPUD2Q9BSE4 406 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 AIG1Q9NVV5 245 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ABCD2Q9UBJ2 740 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 APOBEC3BQ9UH17 382 aaKnown RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 TGM5O43548 720 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 JUPP14923 745 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 STOMP27105 288 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 RAB39AQ14964 217 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ENPP6Q6UWR7 440 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 C6orf89Q6UWU4 347 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ZNF550Q7Z398 422 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 LRRTM3Q86VH5 581 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 ZNF431Q8TF32 576 aaPredicted RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 STOX2Q9P2F5 926 aaPredicted RBP10.98□□□□□ -0.65
USP53-201ENST00000274030 IFT52Q9Y366 437 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 PCDHGB2Q9Y5G2 931 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 DNAJC15Q9Y5T4 150 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
USP53-201ENST00000274030 CD8B2A6NJW9 211 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 M0R036 132 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 CYP17A1P05093 508 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 STSP08842 583 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 CD8BP10966 210 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 S1PR1P21453 382 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 HTR6P50406 440 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 HK3P52790 923 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 SNU13P55769 128 aaKnown RBP10.97□□□□□ -0.65
USP53-201ENST00000274030 E2F1Q01094 437 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 C6orf183Q5T699 404 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 SLC25A25Q6KCM7 469 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 RELL1Q8IUW5 271 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 IL22RA1Q8N6P7 574 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 RDH12Q96NR8 316 aa10.97□□□□□ -0.65
USP53-201ENST00000274030 ZNF350Q9GZX5 532 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms