RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RBBP9O75884 186 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 LATS1O95835 1130 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 EDNRBP24530 442 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TIA1P31483 386 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 GRIK2Q13002 908 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SERINC3Q13530 473 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 BCL2L15Q5TBC7 163 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TPRG1Q6ZUI0 275 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 THAP4Q8WY91 577 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SMPDL3BQ92485 455 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SMARCD2Q92925 531 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 MVB12BQ9H7P6 319 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 Q9Y3F1 56 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 LRRC37A3O60309 1634 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ART1P52961 327 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SLC16A9Q7RTY1 509 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 RASGRP3Q8IV61 690 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 PDZD9Q8IXQ8 264 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 BEST3Q8N1M1 668 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SH3RF2Q8TEC5 729 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SHDQ96IW2 340 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CCDC106Q9BWC9 280 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ICKQ9UPZ9 632 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CYCSP99999 105 aaKnown RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 WDSUB1Q8N9V3 476 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CLEC4CQ8WTT0 213 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 FAM86C1Q9NVL1 165 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 VEGFDO43915 354 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 GABBR2O75899 941 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SFT2D3Q587I9 215 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CEACAM19Q7Z692 300 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 DCAF4L2Q8NA75 395 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 BMFQ96LC9 184 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 EXTL2Q9UBQ6 330 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 RNF11Q9Y3C5 154 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TVP23AA6NH52 213 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF705EA8MWA4 302 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 PLSCR1O15162 318 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CNTN5O94779 1100 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CHMP24386 653 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SHMT2P34897 504 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 RPS13P62277 151 aaKnown RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 NKAPLQ5M9Q1 402 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 C7orf43Q8WVR3 580 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SLC6A16Q9GZN6 736 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ACSL6Q9UKU0 697 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 DNMT3AQ9Y6K1 912 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 LAMB1P07942 1786 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 NWD2Q9ULI1 1742 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 BLOC1S5-TXNDC5H3BN57 136 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SLC31A1O15431 190 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TGFB1P01137 390 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 LEPRP48357 1165 aaKnown RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GINS1Q14691 196 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GTF2IRD2BQ6EKJ0 949 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM205Q6UW68 189 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GTF2IRD2Q86UP8 949 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 LAS2Q8IYD9 372 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR5T1Q8NG75 326 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR13C4Q8NGS5 318 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 FAM46BQ96A09 425 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ATG5Q9H1Y0 275 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PREBQ9HCU5 417 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 KLRG2A4D1S0 409 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HSBP1L1C9JCN9 74 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MEN1O00255 615 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 FBP2O00757 339 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 KCNE1P15382 129 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 DNASE1P24855 282 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PRMT2P55345 433 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MALLQ13021 153 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 EOGTQ5NDL2 527 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 C6orf141Q5SZD1 244 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CYP4V2Q6ZWL3 525 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NELL2Q99435 816 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HERC2P3Q9BVR0 1158 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MROQ9BYG7 248 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HSD3B7Q9H2F3 369 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NEMP2A6NFY4 417 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 F5H0A9 414 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MPC1LP0DKB6 136 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CREB1P16220 341 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF8P17098 575 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MAT2AP31153 395 aaKnown RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CRTC1Q6UUV9 634 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PLD6Q8N2A8 252 aaKnown RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HYLS1Q96M11 299 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ACOT13Q9NPJ3 140 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 DLGAP4Q9Y2H0 992 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HLCSP50747 726 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PLP2Q04941 152 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NOXRED1Q6NXP6 359 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PRSS48Q7RTY5 328 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TOR1AIP2Q8NFQ8 470 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms