RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 POMZP3Q6PJE2 187 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 HSDL2Q6YN16 418 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 CAPN12Q6ZSI9 719 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 OR4N5Q8IXE1 308 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 GPALPP1Q8IXQ4 340 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 NAXEQ8NCW5 288 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 MORN4Q8NDC4 146 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 TTLQ8NG68 377 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 OR8K3Q8NH51 312 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 ASB5Q8WWX0 329 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
TPM3-201ENST00000271850 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 FAR2Q96K12 515 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 UBXN10Q96LJ8 280 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 SMC6Q96SB8 1091 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 TRIM31Q9BZY9 425 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 OR8D2Q9GZM6 311 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 DNAJC11Q9NVH1 559 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 FAM221AA4D161 298 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 PABPN1LA6NDY0 278 aaKnown RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 SAP18O00422 153 aaKnown RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 CLDN4O14493 209 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 AQP7O14520 342 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 DIAPH2O60879 1101 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 STK16O75716 305 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 FAM155BO75949 473 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 LRATO95237 230 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 IFNA16P05015 189 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 HIST1H1TP22492 207 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 ACVR2AP27037 513 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 GSTM2P28161 218 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 CASP2P42575 452 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 IST1P53990 364 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 HNRNPH2P55795 449 aaKnown RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 ARL4CP56559 192 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 WNT3P56703 355 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 GPX6P59796 221 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 DR1Q01658 176 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 PLGLB1Q02325 96 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 ASPHQ12797 758 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 BMPR2Q13873 1038 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 PIGGQ5H8A4 983 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 C18orf63Q68DL7 685 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 TMEM211Q6ICI0 200 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 ZNF585AQ6P3V2 769 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 TRIM40Q6P9F5 258 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 RTL4Q6ZR62 310 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 FRA10AC1Q70Z53 315 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 CMC1Q7Z7K0 106 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 LAS2Q8IYD9 372 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 ZBED8Q8IZ13 594 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 EID3Q8N140 333 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 KRT78Q8N1N4 520 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 TMEM132CQ8N3T6 1108 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 FAM109AQ8N4B1 249 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 ACOT4Q8N9L9 421 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 GOLM1Q8NBJ4 401 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 RELL2Q8NC24 303 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 OR5M3Q8NGP4 307 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 OR14A16Q8NHC5 309 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 GABPB2Q8TAK5 448 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 PPWD1Q96BP3 646 aaKnown RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 ATOH8Q96SQ7 321 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 GPR22Q99680 433 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 FAM173AQ9BQD7 235 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 CCDC77Q9BR77 488 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 PITHD1Q9GZP4 211 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 CXXC4Q9H2H0 198 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 ZNF703Q9H7S9 590 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 IL1RL2Q9HB29 575 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 KCNJ16Q9NPI9 418 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 WWOXQ9NZC7 414 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 KCNN3Q9UGI6 736 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 SNX24Q9Y343 169 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 CHCHD2Q9Y6H1 151 aaPredicted RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 CLCA3PQ9Y6N3 262 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 MED12Q93074 2177 aa8.25□□□□□ -1.09
TPM3-201ENST00000271850 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
TPM3-201ENST00000271850 ATP6AP2A0A1C7CYW4 349 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 TCRBV9S1A1TA0A576 114 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 OR14I1A6ND48 311 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 ANKDD1BA6NHY2 528 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 LRRC14BA6NHZ5 514 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 FAM159BA6NKW6 160 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 PLPP1O14494 284 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 H2AFYO75367 372 aaKnown RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 ATP6AP2O75787 350 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 TGFB1P01137 390 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SLC35E2BP0CK96 405 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 MTHFD2P13995 350 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 HOXB4P17483 251 aaPredicted RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 SOX18P35713 384 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 MSH2P43246 934 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 STT3AP46977 705 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms