RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 GPX5O75715 221 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TP53P04637 393 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 DDCP20711 480 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 XPAP23025 273 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 NNMTP40261 264 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 RHAGQ02094 409 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 DPTQ07507 201 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 GANABQ14697 944 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 STARD3Q14849 445 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 SEC23BQ15437 767 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 RNLSQ5VYX0 342 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TMIGD1Q6UXZ0 262 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FAM83HQ6ZRV2 1179 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 GDPD3Q7L5L3 318 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FAM46DQ8NEK8 389 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OR5P2Q8WZ92 322 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 UBE2E3Q969T4 207 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 EFHD2Q96C19 240 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 OTUB2Q96DC9 234 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 PPP1R16AQ96I34 528 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ZSWIM3Q96MP5 696 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OR2AG1Q9H205 316 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OR52A5Q9H2C5 316 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 CCDC177Q9NQR7 707 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 SIRT3Q9NTG7 399 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 RHCGQ9UBD6 479 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ACAD8Q9UKU7 415 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TRAPPC4Q9Y296 219 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 WBP11Q9Y2W2 641 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 PCDHGB6Q9Y5F9 930 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 PCYT1BQ9Y5K3 369 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 IRAK3Q9Y616 596 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 HTR3EA5X5Y0 456 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FAM227AF5H4B4 570 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 PLPP1O14494 284 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 KMOO15229 486 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 KDM1AO60341 852 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 POP7O75817 140 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 SEMA3DO95025 777 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FGF19O95750 216 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OSMP13725 252 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 SERPINB1P30740 379 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 BSGP35613 385 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 PCBP4P57723 403 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 KCNJ8Q15842 424 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 DEPDC1Q5TB30 811 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 PTCHD4Q6ZW05 846 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 WDR53Q7Z5U6 358 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 SLC44A2Q8IWA5 706 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 ZNF366Q8N895 744 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 POC5Q8NA72 575 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OR4D11Q8NGI4 311 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 OR2L2Q8NH16 312 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FGF11Q92914 225 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ARRDC3Q96B67 414 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ERLEC1Q96DZ1 483 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ZNF764Q96H86 408 aaPredicted RBP11.83□□□□□ -0.52
BEST3-201ENST00000266661 SLC6A18Q96N87 628 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 LHX9Q9NQ69 397 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 CLN6Q9NWW5 311 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 FBXL12Q9NXK8 326 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 SPATA7Q9P0W8 599 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 ZNF229Q9UJW7 825 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 GPR34Q9UPC5 381 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 MUC3AQ02505 3323 aa11.83□□□□□ -0.52
BEST3-201ENST00000266661 LRRK1Q38SD2 2015 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 KIF26AQ9ULI4 1882 aaPredicted RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 CCRL2O00421 344 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 LINC01565O15544 149 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 ENTPD6O75354 484 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 SLITRK5O94991 958 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 OXSR1O95747 527 aaPredicted RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 DNTTP04053 509 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 SCG5P05408 212 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 RHOP08100 348 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 PTPN2P17706 415 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 ELAVL4P26378 380 aaKnown RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 SOAT1P35610 550 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 SEPHS1P49903 392 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 RPS26P11Q5JNZ5 115 aaPredicted RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 PRAMEF14Q5SWL7 426 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 PRAMEF13Q5VWM6 474 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 CEACAM20Q6UY09 585 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 MRPL43Q8N983 215 aaKnown RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 IL17RCQ8NAC3 791 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 HTRA1Q92743 480 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 MRPL38Q96DV4 380 aaKnown RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 ZNF514Q96K75 400 aaPredicted RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 LRRC3BQ96PB8 259 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 IL17FQ96PD4 163 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 TRNT1Q96Q11 434 aaKnown RBP11.82□□□□□ -0.52
BEST3-201ENST00000266661 WFDC6Q9BQY6 131 aa11.82□□□□□ -0.52
BEST3-201ENST00000266661 MS4A8Q9BY19 250 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms