RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PCDHB7Q9Y5E2 793 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 CASKO14936 926 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SOCS5O75159 536 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 GAAP10253 952 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TNNI3P19429 210 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 LHCGRP22888 699 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SSTR4P31391 388 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 GABRA5P31644 462 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 HNF1BP35680 557 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 OR1G1P47890 313 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 PFN3P60673 137 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 HBA1P69905 142 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ADAM15Q13444 863 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 DUSP6Q16828 381 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 COL28A1Q2UY09 1125 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ATAT1Q5SQI0 421 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ATXN7L2Q5T6C5 722 aaPredicted RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ANKRD54Q6NXT1 300 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TPGS1Q6ZTW0 290 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 C16orf59Q7L2K0 433 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 GLRX5Q86SX6 157 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 RNF175Q8N4F7 328 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 FBXL6Q8N531 539 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF431Q8TF32 576 aaPredicted RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM203Q969S6 136 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 UPRTQ96BW1 309 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ACAT2Q9BWD1 397 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 POLDIP3Q9BY77 421 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 RC3H2Q9HBD1 1191 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SGK2Q9HBY8 427 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 NCKAP1Q9Y2A7 1128 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 CDH10Q9Y6N8 788 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM129A0AVI4 362 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 BET1O15155 118 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 OR10H3O60404 316 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 GPR37L1O60883 481 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 C1SP09871 688 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 DDX5P17844 614 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 HK1P19367 917 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 CORO1AP31146 461 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ATP12AP54707 1039 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ARPP19P56211 112 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 COX10Q12887 443 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 DOC2AQ14183 400 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 SUZ12Q15022 739 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 NDUFA9Q16795 377 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 LDLRAD1Q5T700 205 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 GDF6Q6KF10 455 aaPredicted RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 UNC5DQ6UXZ4 953 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 KIF18BQ86Y91 864 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 OR52P1PQ8NH57 321 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 P2RY13Q9BPV8 354 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ATG10Q9H0Y0 220 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 MED28Q9H204 178 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 EMC7Q9NPA0 242 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 U3KQ87 197 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TRAV19A0A0A6YYK7 116 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 TSC22D2O75157 780 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 C6orf47O95873 294 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 DHFRP00374 187 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 DGKGP49619 791 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 RGS1Q08116 209 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 DSC1Q08554 894 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 CDKN3Q16667 212 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ZDHHC20Q5W0Z9 365 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF57Q68EA5 555 aaPredicted RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 REEP3Q6NUK4 255 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 LUZP2Q86TE4 346 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 THOC6Q86W42 341 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 PPCDCQ96CD2 204 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 CHFRQ96EP1 664 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 C17orf62Q9BQA9 187 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 AIFM2Q9BRQ8 373 aa11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 FCF1Q9Y324 198 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 EXOSC1Q9Y3B2 195 aaKnown RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 NUP214P35658 2090 aaPredicted RBP11.8□□□□□ -0.52
CHMP2B-201ENST00000263780 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TRBV4-1A0A0J9YWV2 114 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 TRDV1A0A1B0GX56 115 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC38A8A6NNN8 435 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 HEPACAM2A8MVW5 462 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF197O14709 1029 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 SH3BP5O60239 455 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 H1F0P07305 194 aaKnown RBP11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CD22P20273 847 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 THPOP40225 353 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CSNK1DP48730 415 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 ZNF763Q0D2J5 394 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 GPR17Q13304 367 aa11.79□□□□□ -0.52
CHMP2B-201ENST00000263780 CCL15Q16663 113 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms