RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 ZNF7P17097 686 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CRATP43155 626 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 RPIAP49247 311 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 RPS14P62263 151 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 VEPH1Q14D04 833 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SMAD2Q15796 467 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 OR5AK3PQ8NH89 298 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 C1orf109Q9NX04 203 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PRAMEF33A0A0G2JMD5 474 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 OR2AG2A6NM03 316 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 M0R233 179 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PRAMEF10O60809 474 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 MMP20O60882 483 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 S100PP25815 95 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CHRNA6Q15825 494 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CD300LGQ6UXG3 332 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 TAS1R1Q7RTX1 841 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 KRT78Q8N1N4 520 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 ZNF548Q8NEK5 533 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 C10orf90Q96M02 699 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 REEP1Q9H902 201 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 ASAH2Q9NR71 780 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 MIOXQ9UGB7 285 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SCML2Q9UQR0 700 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SIP14410 1827 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PQLC2LA1A4F0 135 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PCDH17O14917 1159 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SMAD6O43541 496 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 STK16O75716 305 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 ENGP17813 658 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 TGM4P49221 684 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CRISP3P54108 245 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 FOXM1Q08050 763 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CCINQ13939 588 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SLC14A2Q15849 920 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 USP39Q53GS9 565 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 DBX2Q6ZNG2 339 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 TMEM173Q86WV6 379 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 APIPQ96GX9 242 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 ZNF382Q96SR6 550 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PAPOLGQ9BWT3 736 aaKnown RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SRRQ9GZT4 340 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 PIGUQ9H490 435 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 ZCCHC4Q9H5U6 513 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 CDCP1Q9H5V8 836 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 SLC6A14Q9UN76 642 aa13.55□□□□□ -0.24
SCARF1-201ENST00000263071 C2orf78A6NCI8 922 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 C2orf74A8MZ97 194 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SOAT1P35610 550 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 VLDLRP98155 873 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 TOMM20Q15388 145 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 GPR33Q49SQ1 333 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 XKR7Q5GH72 579 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SAXO2Q658L1 398 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ADNP2Q6IQ32 1131 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 MRPL10Q7Z7H8 261 aaKnown RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 PTRH1Q86Y79 214 aaKnown RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 IPCEF1Q8WWN9 437 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 EXOSC8Q96B26 276 aaKnown RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ZFYVE1Q9HBF4 777 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 PDCD5O14737 125 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 FPGTO14772 594 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 RLN2P04090 185 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 RD3LP0DJH9 198 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ACPPP15309 386 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HPGDP15428 266 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 GJA1P17302 382 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SSTR4P31391 388 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 GRK5P34947 590 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ELP6Q0PNE2 266 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 OR5K1Q8NHB7 308 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SORCS2Q96PQ0 1159 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 MCCC1Q96RQ3 725 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 GPN3Q9UHW5 284 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-201ENST00000263071 CNTRLQ7Z7A1 2325 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 ABCD4O14678 606 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 KLKB1P03952 638 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 JUNDP17535 347 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms