RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 XCR1P46094 333 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 NUP107P57740 925 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 CXCR4P61073 352 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 ACTR1AP61163 376 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 STXBP1P61764 594 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 RPP38P78345 283 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 TGM3Q08188 693 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 TCEA2Q15560 299 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF425Q6IV72 752 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 ACOT4Q8N9L9 421 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 OR10G2Q8NGC3 310 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 OR4C15Q8NGM1 316 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 OR8K5Q8NH50 307 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 OR52J3Q8NH60 311 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 SGCDQ92629 289 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC22A18Q96BI1 424 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 TMEM19Q96HH6 336 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC35G5Q96KT7 338 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 AMDHD1Q96NU7 426 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 FEVQ99581 238 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 PITX2Q99697 317 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 SRMSQ9H3Y6 488 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 GLIPR2Q9H4G4 154 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 PRDM7Q9NQW5 492 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 CD207Q9UJ71 328 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 PNMA8BQ9ULN7 279 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 ENPP4Q9Y6X5 453 aa12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-201ENST00000262554 PRAMEF25A6NGN4 478 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 A8MVJ9 347 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 H3BMQ9 156 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 HMGN4O00479 90 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZW10O43264 779 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RASGRP1O95267 797 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 EML2O95834 649 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 JUNDP17535 347 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RHCEP18577 417 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 FMO3P31513 532 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 AKT2P31751 481 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 NCBP2P52298 156 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 KCNC4Q03721 635 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 MAD2L1BPQ15013 274 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 MICAQ29983 383 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 EXOC3L2Q2M3D2 409 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 CYP27C1Q4G0S4 372 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 FBXO43Q4G163 708 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RPS26P11Q5JNZ5 115 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 B3GNT8Q7Z7M8 397 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC44A2Q8IWA5 706 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 UCN3Q969E3 161 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 COG8Q96MW5 612 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF607Q96SK3 696 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 CCDC88CQ9P219 2028 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF624Q9P2J8 865 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 POFUT2Q9Y2G5 429 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 KLHL20Q9Y2M5 609 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 NAALAD2Q9Y3Q0 740 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF451Q9Y4E5 1061 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ASB4Q9Y574 426 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 C4orf51C9J302 202 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 XPNPEP2O43895 674 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 B4GALT2O60909 372 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 GADD45GO95257 159 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 EPHA2P29317 976 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ANXA11P50995 505 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 TMBIM6P55061 237 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SRP54P61011 504 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RPS15AP62244 130 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 YPEL5P62699 121 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 TPRG1LQ5T0D9 272 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 MRM1Q6IN84 353 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 PAQR7Q86WK9 346 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 LGI4Q8N135 537 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC44A3Q8N4M1 653 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RASSF5Q8WWW0 418 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 PROX1Q92786 737 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 RAB8BQ92930 207 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 HRASLS5Q96KN8 279 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SH3GL3Q99963 347 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 CCDC90BQ9GZT6 254 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 LHPPQ9H008 270 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 TMEM168Q9H0V1 697 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF576Q9H609 170 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZNF556Q9HAH1 456 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 SEMA3GQ9NS98 782 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 ZCCHC3Q9NUD5 404 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 P2RX2Q9UBL9 471 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 KLF15Q9UIH9 416 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 MMP17Q9ULZ9 603 aa12.25□□□□□ -0.45
SPTLC1-201ENST00000262554 A0A1W2PR48 441 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 GLOD5A6NK44 160 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 J3KTA2 159 aa12.24□□□□□ -0.45
SPTLC1-201ENST00000262554 SLC28A2O43868 658 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms