RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TMC8Q8IU68 726 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 UBASH3BQ8TF42 649 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 COQ8BQ96D53 544 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ECHDC3Q96DC8 303 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 LRRC3BQ96PB8 259 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 MCCC1Q96RQ3 725 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 KLHL20Q9Y2M5 609 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ENPP4Q9Y6X5 453 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 EIF3FO00303 357 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TLX2O43763 284 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PTPN2P17706 415 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PSMA1P25786 263 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PTPN5P54829 565 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 DSTNP60981 165 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SSX1Q16384 188 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 EXOSC8Q96B26 276 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 CRELD1Q96HD1 420 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TTYH2Q9BSA4 534 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 CLDND1Q9NY35 253 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 KLHL42Q9P2K6 505 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 IFITM2Q01629 132 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 OR4C15Q8NGM1 316 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 XAGE5Q8WWM1 108 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 GDF15Q99988 308 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 RMI1Q9H9A7 625 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 MALT1Q9UDY8 824 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 CDRT1O95170 752 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 FURINP09958 794 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 CYP2A6P11509 494 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 NPPBP16860 134 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 HNRNPFP52597 415 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 SPHARQ15513 63 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 FAM131AQ6UXB0 335 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 TMIGD1Q6UXZ0 262 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 OXR1Q8N573 874 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 GLYATL1Q969I3 302 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 POLR2J3Q9H1A7 115 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 SMURF1Q9HCE7 757 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 N6AMT1Q9Y5N5 214 aa13.78□□□□□ -0.2
SFSWAP-201ENST00000261674 PIPSLA2A3N6 862 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 UGDHO60701 494 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 GPR37L1O60883 481 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 NNMTP40261 264 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 LIM2P55344 173 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 CNTN1Q12860 1018 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 BAK1Q16611 211 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 DCST1Q5T197 706 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 AGAP6Q5VW22 663 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF367Q7RTV3 350 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 GPR155Q7Z3F1 870 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 IL17RDQ8NFM7 739 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 BTN2A2Q8WVV5 523 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 EFHD2Q96C19 240 aaPredicted RBP13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 AGAP4Q96P64 663 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 BHLHE41Q9C0J9 482 aaPredicted RBP13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 BRF2Q9HAW0 419 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 CRNNQ9UBG3 495 aaPredicted RBP13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 CARD8Q9Y2G2 431 aa13.77□□□□□ -0.2
SFSWAP-201ENST00000261674 TMCC2O75069 709 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 CLEC2LP0C7M8 214 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 ALPPL2P10696 532 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 TYRP14679 529 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 GABRB1P18505 474 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 VIPR1P32241 457 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 XCR1P46094 333 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 MESP2Q0VG99 397 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 KRR1Q13601 381 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 FAM214AQ32MH5 1076 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 HTR3DQ70Z44 454 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 Q7L0L9 218 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 MAGEB10Q96LZ2 347 aaPredicted RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 CXorf36Q9H7Y0 433 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 HS3ST2Q9Y278 367 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 ASF1AQ9Y294 204 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 WASHC1A8K0Z3 465 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 MYL12BO14950 172 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 SLITRK5O94991 958 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 LATS1O95835 1130 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 PTNP21246 168 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 S100A1P23297 94 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 XKP51811 444 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 CAV3P56539 151 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 IRF3Q14653 427 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■□□□ 11.6
SFSWAP-201ENST00000261674 SEC23BQ15437 767 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 ZFP69Q49AA0 526 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 LY6G5CQ5SRR4 150 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms