RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 UPP1Q16831 310 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 SRFBP1Q8NEF9 429 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 GPR150Q8NGU9 434 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 DNAJB8Q8NHS0 232 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 TEFMQ96QE5 360 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 FERD3LQ96RJ6 166 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 PARK7Q99497 189 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 CACNG6Q9BXT2 260 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 UBQLN2Q9UHD9 624 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 PFDN2Q9UHV9 154 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 ZNF646O15015 1829 aaPredicted RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 PCM1Q15154 2024 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 TEX13CA0A0J9YWL9 993 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 C2orf78A6NCI8 922 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 GJB5O95377 273 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 LHCGRP22888 699 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 SPAM1P38567 509 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 PCDH1Q08174 1060 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 STX4Q12846 297 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 CBLBQ13191 982 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 ZNF280BQ86YH2 543 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 OR51G2Q8NGK0 314 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.78□□□□□ -0.522e-11■■■■■ 40.8
USP30-201ENST00000257548 AP2M1Q96CW1 435 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 SCRN2Q96FV2 425 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 BRD7Q9NPI1 651 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 ZNF226Q9NYT6 803 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 OR6C2Q9NZP2 312 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 OARD1Q9Y530 152 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 MAB21L2Q9Y586 359 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 TRBV4-1A0A0J9YWV2 114 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 RTCAO00442 366 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 CSO75390 466 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 KHDRBS3O75525 346 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 TSPAN12O95859 305 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 IFNA16P05015 189 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 SERPINA4P29622 427 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 RPS5P46782 204 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 MAPKAPK2P49137 400 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 CBX2Q14781 532 aaPredicted RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 SERPINA11Q86U17 422 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 DNAJA4Q8WW22 397 aaPredicted RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 ERMAPQ96PL5 475 aaPredicted RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
USP30-201ENST00000257548 MED16Q9Y2X0 877 aa11.78□□□□□ -0.52
USP30-201ENST00000257548 L7N2F9 121 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 CACNG3O60359 315 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 NSG1P42857 185 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 ASMTP46597 345 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 ZFP36L2P47974 494 aaKnown RBP11.77□□□□□ -0.52
USP30-201ENST00000257548 CDH11P55287 796 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 HECTD3Q5T447 861 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 SLC25A25Q6KCM7 469 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 SERPINA13PQ6UXR4 307 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 POP5Q969H6 163 aaKnown RBP11.77□□□□□ -0.52
USP30-201ENST00000257548 RFT1Q96AA3 541 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 MCCC1Q96RQ3 725 aaPredicted RBP11.77□□□□□ -0.52
USP30-201ENST00000257548 C17orf62Q9BQA9 187 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 KCNK12Q9HB15 430 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 IL26Q9NPH9 171 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 TRPS1Q9UHF7 1281 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 MYO9BQ13459 2157 aa11.77□□□□□ -0.52
USP30-201ENST00000257548 GLOD5A6NK44 160 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 GIFP27352 417 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 PKLRP30613 574 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
USP30-201ENST00000257548 SRP9P49458 86 aaKnown RBP11.77□□□□□ -0.53
USP30-201ENST00000257548 DSTNP60981 165 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 HBA1P69905 142 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 INSL4Q14641 139 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 EIF4HQ15056 248 aaKnown RBP11.77□□□□□ -0.53
USP30-201ENST00000257548 YIF1BQ5BJH7 314 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 LINGO2Q7L985 606 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 BBS10Q8TAM1 723 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 SECISBP2Q96T21 854 aaKnown RBP11.77□□□□□ -0.53
USP30-201ENST00000257548 FUZQ9BT04 418 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 SLC7A5P2Q9GIP4 190 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 SLC28A3Q9HAS3 691 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 SRRDQ9UH36 339 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 GTF2A1LQ9UNN4 478 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 FRS3O43559 492 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 SLC22A5O76082 557 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 KLHL18O94889 574 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 C4BPBP20851 252 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 BDKRB1P46663 353 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 CLCN7P51798 805 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 FGL2Q14314 439 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 TMC8Q8IU68 726 aa11.77□□□□□ -0.53
USP30-201ENST00000257548 ZBTB44Q8NCP5 570 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms