RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RLN3Q8WXF3 142 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PEX11GQ96HA9 241 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 MARK4Q96L34 752 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ALOXE3Q9BYJ1 711 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 MRPS26Q9BYN8 205 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 FBXL3Q9UKT7 428 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 TCRBV7S2A1N4TA0A589 114 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ASNA1O43681 348 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PFDN1O60925 122 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF432O94892 652 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 WNT11O96014 354 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 HRGP04196 525 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ENGP17813 658 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CD72P21854 359 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 EIF1P41567 113 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 DAP3P51398 398 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 C5orf22Q49AR2 442 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 FAM205BPQ63HN1 556 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 HPS6Q86YV9 775 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 TBC1D20Q96BZ9 403 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 L3HYPDHQ96EM0 354 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC17A7Q9P2U7 560 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 SEC14L5O43304 696 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CHRNGP07510 517 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 POU3F2P20265 443 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ACSL1P33121 698 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CLDN2P57739 230 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 KLF1Q13351 362 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 RAB39AQ14964 217 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 TMEM196Q5HYL7 178 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 KLHL17Q6TDP4 642 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CLNKQ7Z7G1 428 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC7A11Q9UPY5 501 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PRRG2O14669 202 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PXNP49023 591 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 DMTNQ08495 405 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 DOC2AQ14183 400 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 PON3Q15166 354 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 POU5F2Q8N7G0 328 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 OR5L1Q8NGL2 311 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF597Q96LX8 424 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 HDHD2Q9H0R4 259 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 POLE3Q9NRF9 147 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 UBE2QL1A1L167 161 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 FAM92AA1XBS5 289 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 TOX3O15405 576 aaPredicted RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC5A2P31639 672 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 PEX19P40855 299 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 RPL34P49207 117 aaKnown RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LIN54Q6MZP7 749 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 RNF11Q9Y3C5 154 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 CD47Q08722 323 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 FRRS1Q6ZNA5 592 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 PLD6Q8N2A8 252 aaKnown RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LOXL2Q9Y4K0 774 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 A0A1B0GVI7 797 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 RAB36O95755 333 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 ITGB2P05107 769 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 RAB25P57735 213 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 TRAM1Q15629 374 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 TECRLQ5HYJ1 363 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 TMEM211Q6ICI0 200 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 KCTD8Q6ZWB6 473 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 KIF2BQ8N4N8 673 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 CGREF1Q99674 301 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 LMF2Q9BU23 707 aaKnown RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 PIGUQ9H490 435 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC40A1Q9NP59 571 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 SAP18O00422 153 aaKnown RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 MRPL41Q8IXM3 137 aaKnown RBP12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 MINDY1Q8N5J2 469 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 STOML2Q9UJZ1 356 aa12.8□□□□□ -0.36
PRPF38A-201ENST00000257181 ISPDA4D126 451 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 CENPBD1B2RD01 187 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 HHLA1C9JL84 531 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ARPC4P59998 168 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SHC2P98077 582 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PSAPL1Q6NUJ1 521 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 Q6ZNB5 142 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms