RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 AVL9Q8NBF6 648 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CYGBQ8WWM9 190 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 SMIM10Q96HG1 83 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 VPS50Q96JG6 964 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 RNF215Q9Y6U7 377 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 SPTBP11277 2137 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CACNA1EQ15878 2313 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF860A6NHJ4 632 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 PROM1O43490 865 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 FKBP9O95302 570 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 C8orf89P0DMQ9 161 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 PPIBP23284 216 aaKnown RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 ALDH4A1P30038 563 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 TSFMP43897 325 aaKnown RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 GFERP55789 205 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 LRRC23Q53EV4 343 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 OR5P2Q8WZ92 322 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 THAP11Q96EK4 314 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 FBXL20Q96IG2 436 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 CHID1Q9BWS9 393 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 LILRA5A6NI73 299 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 PRKD3O94806 890 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SEC24DO94855 1032 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 RASAL1O95294 804 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 ALPPL2P10696 532 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 FCGR1AP12314 374 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 FRKP42685 505 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 CLCN2P51788 898 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 NR1H2P55055 460 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 DUSP2Q05923 314 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 MERTKQ12866 999 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SHBQ15464 509 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 TMTC4Q5T4D3 741 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 KLHL35Q6PF15 583 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SPRED1Q7Z699 444 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 C19orf47Q8N9M1 422 aaKnown RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 GLIPR2Q9H4G4 154 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SOX17Q9H6I2 414 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 UCK1Q9HA47 277 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SLC35C2Q9NQQ7 365 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 SIRT3Q9NTG7 399 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 DCAF13Q9NV06 445 aaKnown RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 LRIT1Q9P2V4 623 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 PADI4Q9UM07 663 aa17.87■□□□□ 0.45
TRIM47-201ENST00000254816 ARID1BQ8NFD5 2236 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-201ENST00000254816 RHPN2P1A8MT19 583 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 UQCRC2P22695 453 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 RUNX2Q13950 521 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 SUZ12Q15022 739 aaKnown RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 C1orf210Q8IVY1 113 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 SDR16C5Q8N3Y7 309 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 CSNK1A1LQ8N752 337 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 OR52N2Q8NGI0 321 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 KLHL6Q8WZ60 621 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 TMIGD2Q96BF3 282 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 MPP4Q96JB8 637 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 TGM7Q96PF1 710 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 CCDC3Q9BQI4 270 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 KLHL3Q9UH77 587 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 CORO2BQ9UQ03 480 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 GMEB1Q9Y692 573 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 SPEGQ15772 3267 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 HRO43593 1189 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 LDLRP01130 860 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 GIMD1P0DJR0 217 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 RPS26P62854 115 aaKnown RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 RELAQ04206 551 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 LSAMPQ13449 338 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 OFCC1Q8IZS5 231 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF786Q8N393 782 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 MAGEE2Q8TD90 523 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 GAB3Q8WWW8 586 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 ZBED6CLQ96FA7 236 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 ELF4Q99607 663 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 NLNQ9BYT8 704 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 TAS2R7Q9NYW3 318 aa17.86■□□□□ 0.45
TRIM47-201ENST00000254816 FAF1Q9UNN5 650 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-201ENST00000254816 WDFY4Q6ZS81 3184 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ASXL3Q9C0F0 2248 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 CCDC88CQ9P219 2028 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 URADA6NGE7 173 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 H3BSA7 217 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 CASC3O15234 703 aaKnown RBP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 B4GALT2O60909 372 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 GUCY1B2O75343 617 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 RETP07949 1114 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 GNSP15586 552 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF23P17027 643 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 AQP1P29972 269 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 FEN1P39748 380 aaKnown RBP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 NCBP2P52298 156 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 MAP7Q14244 749 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 PLK5Q496M5 336 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 FAM98BQ52LJ0 330 aaKnown RBP17.85■□□□□ 0.45
TRIM47-201ENST00000254816 C6orf132Q5T0Z8 1188 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 TBPL2Q6SJ96 375 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 ABHD13Q7L211 337 aa17.85■□□□□ 0.45
TRIM47-201ENST00000254816 CNRIP1Q96F85 164 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms