RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ZAR1LA6NP61 321 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 H0YIV9 168 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 AGRPO00253 132 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SEC14L5O43304 696 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 CSO75390 466 aaKnown RBP18.04■□□□□ 0.48
SNX4-201ENST00000251775 SLC16A8O95907 504 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 TIMP1P01033 207 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 RHOP08100 348 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 IMPA1P29218 277 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 PDHA2P29803 388 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 CNR2P34972 360 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ALDH9A1P49189 494 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 NTHL1P78549 312 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 HTRA3P83110 453 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 RUNX1T1Q06455 604 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ZNF33BQ06732 778 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 TEAD4Q15561 434 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ZNF284Q2VY69 593 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SYCE2Q6PIF2 218 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 TCTE3Q8IZS6 198 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SNAPC3Q92966 411 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ZSWIM3Q96MP5 696 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SEC14L4Q9UDX3 406 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 IL36AQ9UHA7 158 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ITM2BQ9Y287 266 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ZSCAN5BA6NJL1 495 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 WWP2O00308 870 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PIPP12273 146 aaPredicted RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 PSMA1P25786 263 aaKnown RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 ERP29P30040 261 aaKnown RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 CYP27C1Q4G0S4 372 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 ZNF805Q5CZA5 627 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 WDR45BQ5MNZ6 344 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PLPP4Q5VZY2 271 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 DPPA4Q7L190 304 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 C11orf74Q86VG3 221 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 SLC44A2Q8IWA5 706 aaPredicted RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 C1orf52Q8N6N3 182 aaKnown RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 YIPF7Q8N8F6 280 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 TTC9Q92623 222 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 SLC25A19Q9HC21 320 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 ACER3Q9NUN7 267 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 LRRK1Q38SD2 2015 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 ATG13O75143 517 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 CBLP22681 906 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 XPAP23025 273 aaPredicted RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 ITGB7P26010 798 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PBLDP30039 288 aaPredicted RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 OR3A3P47888 321 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PRLHRP49683 370 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 CASP9P55211 416 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 TMEM115Q12893 351 aaPredicted RBP18.03■□□□□ 0.48
SNX4-201ENST00000251775 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 XKRXQ6PP77 449 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PAMR1Q6UXH9 720 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 LIPIQ6XZB0 460 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 PEX5LQ8IYB4 626 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 MAPKAP1Q9BPZ7 522 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 THSD1Q9NS62 852 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 STUB1Q9UNE7 303 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 HCN4Q9Y3Q4 1203 aa18.03■□□□□ 0.48
SNX4-201ENST00000251775 HYKKA2RU49 373 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 GABRR3A8MPY1 467 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 PLA2G10O15496 165 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 MPZL2O60487 215 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 EFCAB14O75071 495 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 ENTPD6O75354 484 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 CATP04040 527 aaKnown RBP18.02■□□□□ 0.48
SNX4-201ENST00000251775 DDX6P26196 483 aaKnown RBP eCLIP18.02■□□□□ 0.488e-8■■■■□ 25.1
SNX4-201ENST00000251775 HLA-DMAP28067 261 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 NNMTP40261 264 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 LIMS1P48059 325 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 DGKEP52429 567 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 C21orf58P58505 322 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 MXD1Q05195 221 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 SAXO2Q658L1 398 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 TMEM220Q6QAJ8 160 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 KLHL17Q6TDP4 642 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 LAS2Q8IYD9 372 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 SLC38A6Q8IZM9 456 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 SIX5Q8N196 739 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 OR5H6Q8NGV6 325 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 OR56A3Q8NH54 315 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 AP2M1Q96CW1 435 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 VPS35Q96QK1 796 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 GPATCH2Q9NW75 528 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 CORO2BQ9UQ03 480 aa18.02■□□□□ 0.48
SNX4-201ENST00000251775 QSOX1O00391 747 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 SCAMP2O15127 329 aaKnown RBP18.02■□□□□ 0.47
SNX4-201ENST00000251775 PPIBP23284 216 aaKnown RBP18.02■□□□□ 0.47
SNX4-201ENST00000251775 IFNA8P32881 189 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 CSTF2P33240 577 aaKnown RBP eCLIP18.02■□□□□ 0.47
SNX4-201ENST00000251775 MMP12P39900 470 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 SPHARQ15513 63 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 ARHGAP15Q53QZ3 475 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 COX20Q5RI15 118 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 KLHDC8AQ8IYD2 350 aa18.02■□□□□ 0.47
SNX4-201ENST00000251775 ZNF557Q8N988 423 aaPredicted RBP18.02■□□□□ 0.47
SNX4-201ENST00000251775 AQP11Q8NBQ7 271 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms