RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ANHXE9PGG2 379 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 GFYI3L273 518 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 CTDSP2O14595 271 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 SGTAO43765 313 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 UGDHO60701 494 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ASMTP46597 345 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 MED22Q15528 200 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ATAD3CQ5T2N8 411 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ZDHHC20Q5W0Z9 365 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 TRAM1L1Q8N609 369 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 OR4A15Q8NGL6 344 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 OR6F1Q8NGZ6 308 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 FOXJ1Q92949 421 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 MGLLQ99685 303 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 CDCA4Q9BXL8 241 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 MKRN2Q9H000 416 aaKnown RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 CCDC177Q9NQR7 707 aaPredicted RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ERVK13-1Q9NX77 482 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF282Q9UDV7 671 aaPredicted RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 EFCAB10A6NFE3 127 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 C1QTNF3-AMACRE9PGA6 284 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 SOD1P00441 154 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ADRA2AP08913 450 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ARPC4P59998 168 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 RAE1P78406 368 aaKnown RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 TP53BP2Q13625 1128 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 RAET1GQ6H3X3 334 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ANGPTL8Q6UXH0 198 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ATCAYQ86WG3 371 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 UBQLNLQ8IYU4 475 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 C1orf52Q8N6N3 182 aaKnown RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 RASGEF1AQ8N9B8 481 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 BTN2A2Q8WVV5 523 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 GLYATL1Q969I3 302 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 C11orf24Q96F05 449 aaPredicted RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ZSCAN5AQ9BUG6 496 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF556Q9HAH1 456 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 KCNK12Q9HB15 430 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 SMURF1Q9HCE7 757 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 CRNNQ9UBG3 495 aaPredicted RBP16.17■□□□□ 0.18
FOXA1-201ENST00000250448 TBC1D24Q9ULP9 559 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 SLC6A14Q9UN76 642 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 PIAS3Q9Y6X2 628 aa16.17■□□□□ 0.18
FOXA1-201ENST00000250448 A0A075B6Q4 140 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 A8MVJ9 347 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 E7EQ34 232 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CCRL2O00421 344 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 NARSO43776 548 aaKnown RBP16.16■□□□□ 0.18
FOXA1-201ENST00000250448 IDSP22304 550 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CRATP43155 626 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 DCDC1P59894 354 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CST6Q15828 149 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 BCL7AQ4VC05 210 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 PIP5KL1Q5T9C9 394 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CAMKMTQ7Z624 323 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 PLA2G15Q8NCC3 412 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 HCAR2Q8TDS4 363 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 NUS1Q96E22 293 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 THSD1Q9NS62 852 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 TRAPPC4Q9Y296 219 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 FAM172BPA6NC97 362 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 A6NL46 340 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 ARHGAP33O14559 1287 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 PCDH8O95206 1070 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 ANXA4P09525 319 aaPredicted RBP16.16■□□□□ 0.18
FOXA1-201ENST00000250448 ETFAP13804 333 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 HTR3AP46098 478 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 TAS2R38P59533 333 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CDC42P60953 191 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 DOC2AQ14183 400 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 TMEM196Q5HYL7 178 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 COX20Q5RI15 118 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 PLEKHS1Q5SXH7 462 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 NLRP8Q86W28 1048 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 LILRB4Q8NHJ6 448 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 GANCQ8TET4 914 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 TMCO6Q96DC7 493 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CNOT2Q9NZN8 540 aaKnown RBP16.16■□□□□ 0.18
FOXA1-201ENST00000250448 PRAMEF25A6NGN4 478 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 IGLON5A6NGN9 336 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CAPN5O15484 640 aaPredicted RBP16.16■□□□□ 0.18
FOXA1-201ENST00000250448 TSPAN6O43657 245 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 SH3BGRLO75368 114 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 SLITRK5O94991 958 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 ETHE1O95571 254 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 CASP9P55211 416 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 GCNT6Q5T4J0 391 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 NUDT18Q6ZVK8 323 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 OR8H2Q8N162 312 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 HDDC3Q8N4P3 179 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 FLCNQ8NFG4 579 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 OR2A14Q96R47 310 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 MAPRE3Q9UPY8 281 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 GRIP1Q9Y3R0 1128 aa16.16■□□□□ 0.18
FOXA1-201ENST00000250448 HSD3B1P14060 373 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 ENDOUP21128 410 aaKnown RBP16.15■□□□□ 0.18
FOXA1-201ENST00000250448 HSD3B2P26439 372 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 PREPP48147 710 aa16.15■□□□□ 0.18
FOXA1-201ENST00000250448 MVDP53602 400 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms