RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TAS2R9Q9NYW1 312 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 KCND3Q9UK17 655 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 HEATR5BQ9P2D3 2071 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 UPK1BO75841 260 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 CXCL14O95715 111 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 RHOP08100 348 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 UGT2B10P36537 528 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 SLC15A1P46059 708 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 RUNX1T1Q06455 604 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 ELP6Q0PNE2 266 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 ZNF284Q2VY69 593 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
COPB1-201ENST00000249923 FAM129CQ86XR2 697 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 GALNT12Q8IXK2 581 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 HORMAD2Q8N7B1 307 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 AMER3Q8N944 861 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 FBXO15Q8NCQ5 510 aaPredicted RBP9.63□□□□□ -0.87
COPB1-201ENST00000249923 ING5Q8WYH8 240 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 ARRDC3Q96B67 414 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 MENTQ9BUN1 341 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 TM7SF3Q9NS93 570 aa9.63□□□□□ -0.87
COPB1-201ENST00000249923 ZSCAN5BA6NJL1 495 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CTDSP2O14595 271 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 AP3D1O14617 1153 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PPM1DO15297 605 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ARAFP10398 606 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 POLR2EP19388 210 aaKnown RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 CD72P21854 359 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SOAT1P35610 550 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 DEFB115Q30KQ5 88 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 GPR65Q8IYL9 337 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CADM2Q8N3J6 435 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 AQP11Q8NBQ7 271 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PLA2G15Q8NCC3 412 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 OR5AR1Q8NGP9 310 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CXorf40BQ96DE9 158 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TRNT1Q96Q11 434 aaKnown RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 PIP5K1AQ99755 562 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ACAT2Q9BWD1 397 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 AICDAQ9GZX7 198 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 MMP28Q9H239 520 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CTPS2Q9NRF8 586 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SAGE1Q9NXZ1 904 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SLC23A2Q9UGH3 650 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CORO2BQ9UQ03 480 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 POFUT2Q9Y2G5 429 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 LAMA1P25391 3075 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ZAR1LA6NP61 321 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TPST2O60704 377 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TMCC2O75069 709 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SNRNP200O75643 2136 aaKnown RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 TP53P04637 393 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 CKMT1AP12532 417 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PCSK2P16519 638 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PPIBP23284 216 aaKnown RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 PSMB5P28074 263 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ARPC4P59998 168 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 BCL7AQ4VC05 210 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ARMCX4Q5H9R4 360 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 C10orf62Q5T681 223 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 HOMEZQ8IX15 550 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 VPS37AQ8NEZ2 397 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 VANGL1Q8TAA9 524 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 SLC38A5Q8WUX1 472 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 PPCDCQ96CD2 204 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TIFAQ96CG3 184 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TOX2Q96NM4 488 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 YME1L1Q96TA2 773 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TAPBPLQ9BX59 468 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 NMNAT1Q9HAN9 279 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 SIRT3Q9NTG7 399 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 CUEDC1Q9NWM3 386 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 RAB23Q9ULC3 237 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CACNA1CQ13936 2221 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 SDK1Q7Z5N4 2213 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TRBC2A0A5B9 178 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 H3BN98 237 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 GNRH1P01148 92 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CNR2P34972 360 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 RECQLP46063 649 aaPredicted RBP9.62□□□□□ -0.87
COPB1-201ENST00000249923 FLYWCH1Q4VC44 716 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 TRAPPC5Q8IUR0 188 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 GHDCQ8N2G8 530 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 OR9A1PQ8NGU1 263 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 RNF208Q9H0X6 261 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 OR52A5Q9H2C5 316 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 CLEC2DQ9UHP7 191 aa9.62□□□□□ -0.87
COPB1-201ENST00000249923 ABHD14A-ACY1A0A1B0GW23 586 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 FAM47E-STBD1D6RA91 191 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ZW10O43264 779 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 EPPINO95925 133 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CYP17A1P05093 508 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PTGER1P34995 402 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms