RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-202ENST00000244303 CCDC59Q9P031 241 aaKnown RBP13.68□□□□□ -0.22
HIF3A-202ENST00000244303 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
HIF3A-202ENST00000244303 GPR34Q9UPC5 381 aa13.68□□□□□ -0.22
HIF3A-202ENST00000244303 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
HIF3A-202ENST00000244303 NUMA1Q14980 2115 aa13.68□□□□□ -0.22
HIF3A-202ENST00000244303 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-202ENST00000244303 SH3D21A4FU49 640 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 EFCAB10A6NFE3 127 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ANKDD1BA6NHY2 528 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 POU2F2P09086 479 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 SEPHS1P49903 392 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 MAPK12P53778 367 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 DOC2BQ14184 412 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 BCL2A1Q16548 175 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 C9orf64Q5T6V5 341 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 STEAP3Q658P3 488 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ETFBKMTQ8IXQ9 262 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ANKRD53Q8N9V6 530 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 FAM83FQ8NEG4 500 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 GPR32P1Q8NGA4 272 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 RAB8BQ92930 207 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 TM4SF18Q96CE8 201 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 C11orf16Q9NQ32 467 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CUEDC1Q9NWM3 386 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CLN6Q9NWW5 311 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 AHSPQ9NZD4 102 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CNOT2Q9NZN8 540 aaKnown RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 DPP7Q9UHL4 492 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 KLK4Q9Y5K2 254 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 DSPPQ9NZW4 1301 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 ISPDA4D126 451 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 MPZL2O60487 215 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 SEMA7AO75326 666 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 RB1P06400 928 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 KELP23276 732 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 GTF2E2P29084 291 aaKnown RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 S100A5P33763 92 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 DPTQ07507 201 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 HSPB3Q12988 150 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 TSTQ16762 297 aaKnown RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 KHDRBS2Q5VWX1 349 aaKnown RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 PDZD3Q86UT5 571 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 SLC7A5P1Q8MH63 180 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 PLA2G15Q8NCC3 412 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 OR8D1Q8WZ84 308 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 OR5P2Q8WZ92 322 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 HTRA1Q92743 480 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 EFHD2Q96C19 240 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-202ENST00000244303 MGLLQ99685 303 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 SP140LQ9H930 580 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 QPCTLQ9NXS2 382 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CKAP5Q14008 2032 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
HIF3A-202ENST00000244303 SAGE2PA6NJ88 616 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PDPK1O15530 556 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 VEGFDO43915 354 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 B4GALT2O60909 372 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 MFN2O95140 757 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 SOX14O95416 240 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 DNTTP04053 509 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 BSGP35613 385 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 UGT2B15P54855 530 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 CDC20Q12834 499 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 SEC23BQ15437 767 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 CARTPTQ16568 116 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 ZNF362Q5T0B9 420 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 DEPDC1Q5TB30 811 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TMC5Q6UXY8 1006 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 ADGRD2Q7Z7M1 963 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 C17orf64Q86WR6 236 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 CLIP4Q8N3C7 705 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PARP16Q8N5Y8 322 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 FAM46DQ8NEK8 389 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TMIEQ8NEW7 156 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 WDR36Q8NI36 951 aaKnown RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 IL4I1Q96RQ9 567 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 MYO10Q9HD67 2058 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 FEZF1A0PJY2 475 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 SH3BP5O60239 455 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 KIAA0513O60268 411 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 IGFBP1P08833 259 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PSMB5P28074 263 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 OPRD1P41143 372 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 ZNF45Q02386 682 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 PRKCDQ05655 676 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 TP53BP2Q13625 1128 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 GAB4Q2WGN9 574 aa13.66□□□□□ -0.22
HIF3A-202ENST00000244303 HNRNPA1L2Q32P51 320 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms