RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HDAC2Q92769 488 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 RAB8BQ92930 207 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF300Q96RE9 604 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 GPR174Q9BXC1 333 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 NPLQ9BXD5 320 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 DDX18Q9NVP1 670 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 TESMINQ9Y4I5 508 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 LYVE1Q9Y5Y7 322 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 OR6C74A6NCV1 312 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 BCKDKO14874 412 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 PROM1O43490 865 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 RECKO95980 971 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 BCHEP06276 602 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 CELA2BP08218 269 aaPredicted RBP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 CRHBPP24387 322 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 RYKP34925 604 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 CLK3P49761 638 aaKnown RBP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 NCBP2P52298 156 aaKnown RBP eCLIP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 TPD52P55327 224 aaPredicted RBP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 IL18R1Q13478 541 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 TDGQ13569 410 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 TP53BP2Q13625 1128 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF750Q32MQ0 723 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF542PQ5EBM4 170 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 RPS26P11Q5JNZ5 115 aaPredicted RBP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 DGLUCYQ7Z3D6 616 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ASPGQ86U10 573 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 SFTPA2Q8IWL1 248 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 TRIM48Q8IWZ4 208 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 SUN3Q8TAQ9 357 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 NT5CQ8TCD5 201 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ZFPM2Q8WW38 1151 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 CNRIP1Q96F85 164 aaPredicted RBP17.49■□□□□ 0.39
HOXC11-201ENST00000243082 TMEM19Q96HH6 336 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 BBS4Q96RK4 519 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF347Q96SE7 839 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 GPR27Q9NS67 375 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 ACTR10Q9NZ32 417 aa17.49■□□□□ 0.39
HOXC11-201ENST00000243082 SPTY2D1-AS1A0A0U1RR47 76 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ENO4A6NNW6 628 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ADAMDEC1O15204 470 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 AHCYL1O43865 530 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 CTSVO60911 334 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 UGT2B11O75310 529 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ERAL1O75616 437 aaKnown RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 VIPP01282 170 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 NTSP30990 170 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 BTN3A2P78410 334 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 DUSP2Q05923 314 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 RAPSNQ13702 412 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 FZD2Q14332 565 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 DUSP7Q16829 419 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 COL13A1Q5TAT6 717 aaPredicted RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 FCRL6Q6DN72 434 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 SLC48A1Q6P1K1 146 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ATG16L2Q8NAA4 619 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 FBLIM1Q8WUP2 373 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 GEMIN6Q8WXD5 167 aaKnown RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 GAL3ST3Q96A11 431 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 TM4SF19Q96DZ7 209 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 OR2A5Q96R48 311 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 RSPO3Q9BXY4 272 aaPredicted RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 RIBC2Q9H4K1 309 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 CPNE7Q9UBL6 633 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 SLCO1B1Q9Y6L6 691 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 CHURC1-FNTBB4DL54 471 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 TNFRSF11BO00300 401 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 THEGLP0DJG4 465 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 GPC1P35052 558 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 UBE2IP63279 158 aaKnown RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 IL1RL1Q01638 556 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 SIM2Q14190 667 aaPredicted RBP17.48■□□□□ 0.39
HOXC11-201ENST00000243082 OR4C15Q8NGM1 316 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 OR10G6Q8NH81 332 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 MAPKAP1Q9BPZ7 522 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ORAI3Q9BRQ5 295 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 GSDMCQ9BYG8 508 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ADNPQ9H2P0 1102 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 KRT84Q9NSB2 600 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 EXD2Q9NVH0 621 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 ZSCAN32Q9NX65 697 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 SH3GLB1Q9Y371 365 aa17.48■□□□□ 0.39
HOXC11-201ENST00000243082 A0A1W2PS29 197 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PRAMEF27A3QJZ7 478 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 C5orf58C9J3I9 102 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 SH3BP5O60239 455 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF888P0CJ79 500 aaPredicted RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 CYP4B1P13584 511 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 ITGA2P17301 1181 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 CD6P30203 668 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PTGER1P34995 402 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 XCR1P46094 333 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 TGM3Q08188 693 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 GAS6Q14393 721 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 CCDC85BQ15834 202 aaPredicted RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF773Q6PK81 442 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 FIGLAQ6QHK4 219 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 KCTD8Q6ZWB6 473 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 SLC44A2Q8IWA5 706 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms