RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SPNS1Q9H2V7 528 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 EXO5Q9H790 373 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 HPF1Q9NWY4 346 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 MKS1Q9NXB0 559 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 DCDC2Q9UHG0 476 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 ZNF223Q9UK11 482 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-201ENST00000242776 PDE10AQ9Y233 779 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 FAM215AQ9Y5M1 114 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 NCKAP5O14513 1909 aa12.81□□□□□ -0.36
DDX39A-201ENST00000242776 ATP6AP2A0A1C7CYW4 349 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 TCRBV16S1A1N1A0A5B0 115 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ACOT7O00154 380 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ATP6AP2O75787 350 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 CELA3AP09093 270 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 CD1DP15813 335 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ACAP2Q15057 778 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 CATSPEREQ5SY80 951 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 TMEM198Q66K66 360 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 RTL6Q6ICC9 239 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 QSOX2Q6ZRP7 698 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 FRA10AC1Q70Z53 315 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 CENPLQ8N0S6 344 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-201ENST00000242776 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 APCDD1LQ8NCL9 501 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 B3GNT7Q8NFL0 401 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 KCTD4Q8WVF5 259 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ANKRD49Q8WVL7 239 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 NCLNQ969V3 563 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 TTTY12Q9BZ98 90 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 PCBD2Q9H0N5 130 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 KLHL31Q9H511 634 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
DDX39A-201ENST00000242776 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 RASSF1Q9NS23 344 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 ACAD8Q9UKU7 415 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 GRID1Q9ULK0 1009 aa12.8□□□□□ -0.36
DDX39A-201ENST00000242776 A0A0G2JN53 185 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 FIGNL2A6NMB9 653 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 WWP2O00308 870 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 OR2J2O76002 312 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 OR6B1O95007 311 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 ENO2P09104 434 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-201ENST00000242776 NPPBP16860 134 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 ADSLP30566 484 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-201ENST00000242776 MAGEA5P43359 124 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 CCR8P51685 355 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 RGS1Q08116 209 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 XKR6Q5GH73 641 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 EXOC3L1Q86VI1 746 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 ARMC2Q8NEN0 867 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 UTP15Q8TED0 518 aaKnown RBP12.79□□□□□ -0.36
DDX39A-201ENST00000242776 CREB3L4Q8TEY5 395 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 ARL8AQ96BM9 186 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 NXNL1Q96CM4 212 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 TLCD1Q96CP7 247 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 SCYL1Q96KG9 808 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 TRIM54Q9BYV2 358 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 LDAHQ9H6V9 325 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 DMRT3Q9NQL9 472 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 MID2Q9UJV3 735 aa12.79□□□□□ -0.36
DDX39A-201ENST00000242776 NPEPPSL1A6NEC2 478 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 RBP1P09455 135 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 FREM3P0C091 2139 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 RNH1P13489 461 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CRHR1P34998 444 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SOX3P41225 446 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 MAGOHP61326 146 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CCDC153Q494R4 210 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 TTMPQ5BVD1 217 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 TOR1AIP1Q5JTV8 583 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 C1orf185Q5T7R7 199 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 LCTLQ6UWM7 567 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SLC22A16Q86VW1 577 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 TMEM251Q8N6I4 163 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 BANPQ8N9N5 519 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 STAG3L4Q8TBR4 150 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 KIAA1191Q96A73 305 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 RNF112Q9ULX5 631 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 C4orf51C9J302 202 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CDK2AP1O14519 115 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 BCKDKO14874 412 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SPAG7O75391 227 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 FOSL1P15407 271 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 DNASE1L1P49184 302 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms