RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ATAD3BQ5T9A4 648 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 FAM83HQ6ZRV2 1179 aaPredicted RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 FAM92BQ6ZTR7 304 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 OR2L2Q8NH16 312 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 ZNF514Q96K75 400 aaPredicted RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 TRNT1Q96Q11 434 aaKnown RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 IL4I1Q96RQ9 567 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 UCK2Q9BZX2 261 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 MIR1-1HGQ9H1L0 117 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 AHSPQ9NZD4 102 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 TMCC3Q9ULS5 477 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 ATP11BQ9Y2G3 1177 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 LSM2Q9Y333 95 aaKnown RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 PNMA8CA0A1B0GUJ8 204 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 TBX19O60806 448 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 GPX5O75715 221 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 SEMA3DO95025 777 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 C6P13671 934 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 OPRD1P41143 372 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 MNX1P50219 401 aaPredicted RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 RHAGQ02094 409 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.47■□□□□ 0.07
LTBR-201ENST00000228918 ARHGEF6Q15052 776 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 SPANXN2Q5MJ10 180 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 TMEM201Q5SNT2 666 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 SLX4IPQ5VYV7 408 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 DESI1Q6ICB0 168 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 AKAP14Q86UN6 197 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 CLIP4Q8N3C7 705 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 C2orf73Q8N5S3 287 aaPredicted RBP15.47■□□□□ 0.07
LTBR-201ENST00000228918 ARRDC3Q96B67 414 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 DHRS1Q96LJ7 313 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 ACAT2Q9BWD1 397 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 NUAK2Q9H093 628 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 ABCG4Q9H172 646 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 OR52A5Q9H2C5 316 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 HHATLQ9HCP6 504 aa15.47■□□□□ 0.07
LTBR-201ENST00000228918 HIDE1A8MVS5 230 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 RTCAO00442 366 aaKnown RBP15.46■□□□□ 0.07
LTBR-201ENST00000228918 KMOO15229 486 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 PDPK1O15530 556 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 PRNPP04156 253 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 SCG5P05408 212 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 MAPK12P53778 367 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 ILKQ13418 452 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 KHDRBS2Q5VWX1 349 aaKnown RBP15.46■□□□□ 0.07
LTBR-201ENST00000228918 TCTN3Q6NUS6 607 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 C11orf96Q7Z7L8 435 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 OR5AR1Q8NGP9 310 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 RAD51AP1Q96B01 352 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 TM4SF18Q96CE8 201 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 ZSWIM3Q96MP5 696 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 NEUROD4Q9HD90 331 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 GPR34Q9UPC5 381 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 ASF1AQ9Y294 204 aa15.46■□□□□ 0.07
LTBR-201ENST00000228918 A0A075B6Q4 140 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 ANKDD1BA6NHY2 528 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 TPD52L2O43399 206 aaKnown RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 B4GALT2O60909 372 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 SOX14O95416 240 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 MAGP20916 626 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 ITGB7P26010 798 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 BSGP35613 385 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 FEN1P39748 380 aaKnown RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 MANFP55145 182 aaKnown RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 ERVFC1P60507 584 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 ST8SIA6P61647 398 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 NTHL1P78549 312 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 KRR1Q13601 381 aaKnown RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 DHCR24Q15392 516 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 CARTPTQ16568 116 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 MEDAGQ5VYS4 303 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 C12orf73Q69YU5 71 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 ZNF784Q8NCA9 323 aaPredicted RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 SDHCQ99643 169 aaPredicted RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 MS4A8Q9BY19 250 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 RNF208Q9H0X6 261 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 RHBGQ9H310 441 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 SIRT3Q9NTG7 399 aaPredicted RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 PCDH10Q9P2E7 1040 aa15.46■□□□□ 0.06
LTBR-201ENST00000228918 PCYT1BQ9Y5K3 369 aaPredicted RBP15.46■□□□□ 0.06
LTBR-201ENST00000228918 LOC110117498-PIK3R3F6TDL0 507 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 FAAHO00519 579 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 PDE9AO76083 593 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 IGFBP1P08833 259 aaPredicted RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 CSF2RAP15509 400 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 ENDOUP21128 410 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 TCEA1P23193 301 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 KELP23276 732 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CSTF2P33240 577 aaKnown RBP eCLIP15.45■□□□□ 0.06
LTBR-201ENST00000228918 DPTQ07507 201 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 DCST1Q5T197 706 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 GDPD3Q7L5L3 318 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 C12orf40Q86WS4 652 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 NATD1Q8N6N6 113 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 ANKRD53Q8N9V6 530 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 WFIKKN2Q8TEU8 576 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 PIK3R3Q92569 461 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms