RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 BMP5P22003 454 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 TACR1P25103 407 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 HOXC12P31275 282 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 CEACAM8P31997 349 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 HPDP32754 393 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 GDF5P43026 501 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 STX4Q12846 297 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 SERTAD2Q14140 314 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 RCN2Q14257 317 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 C18orf21Q32NC0 220 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 PIGGQ5H8A4 983 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 IGDCC3Q8IVU1 814 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 RASGEF1CQ8N431 466 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 TNIP2Q8NFZ5 429 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 NEIL3Q8TAT5 605 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 NUBPLQ8TB37 319 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 CCT6BQ92526 530 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 KIAA1191Q96A73 305 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 C18orf12Q96KH6 178 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 NAT9Q9BTE0 207 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 SLC6A15Q9H2J7 730 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 EHD1Q9H4M9 534 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 EXO5Q9H790 373 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 PLEKHF2Q9H8W4 249 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 PROK2Q9HC23 129 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 LYRM4Q9HD34 91 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 PRDM7Q9NQW5 492 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 QPCTLQ9NXS2 382 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 COPS7AQ9UBW8 275 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 FOXD3Q9UJU5 478 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 BOKQ9UMX3 212 aaPredicted RBP10.65□□□□□ -0.7
FRG1-201ENST00000226798 OARD1Q9Y530 152 aa10.65□□□□□ -0.7
FRG1-201ENST00000226798 PRAMEF4O60810 478 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 H2AFYO75367 372 aaKnown RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 KCNJ2P63252 427 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 IGLV3-21P80748 117 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 ASPHQ12797 758 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 PRAMEF20Q5VT98 475 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 PRAMEF9Q5VWM5 478 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 SLC22A10Q63ZE4 541 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 TRMT10BQ6PF06 316 aaKnown RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 ZNF793Q6ZN11 406 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 MAATS1Q7Z4T9 603 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 ADAMTSL2Q86TH1 951 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 C9orf40Q8IXQ3 194 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 KRT78Q8N1N4 520 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 ANKRD9Q96BM1 317 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 RHBDF1Q96CC6 855 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 ARSGQ96EG1 525 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 LRRC46Q96FV0 321 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 MS4A14Q96JA4 679 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 EGFL8Q99944 293 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 COPS7BQ9H9Q2 264 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 GPRC5BQ9NZH0 403 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 ZNF629Q9UEG4 869 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 CHCHD2Q9Y6H1 151 aaPredicted RBP10.64□□□□□ -0.71
FRG1-201ENST00000226798 ARID1AO14497 2285 aa10.64□□□□□ -0.71
FRG1-201ENST00000226798 CUBNO60494 3623 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 ANKDD1BA6NHY2 528 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 SCELO95171 688 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 GOSR1O95249 250 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 EPPINO95925 133 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 INHBBP09529 407 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 EPXP11678 715 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 TNNI3P19429 210 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 TIMP3P35625 211 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 KCNC1P48547 511 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 ZNF136P52737 540 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 WNT3P56703 355 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 SORDQ00796 357 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 ID2Q02363 134 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 CRYZQ08257 329 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 KEAP1Q14145 624 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 ZNF460Q14592 562 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 TSNQ15631 228 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 Q71RC1 249 aaPredicted RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 UBE3DQ7Z6J8 389 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 LACC1Q8IV20 430 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 DND1Q8IYX4 353 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 NKAPQ8N5F7 415 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 SLC22A8Q8TCC7 542 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 WDR34Q96EX3 536 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 CAPZA3Q96KX2 299 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 RUNDC3BQ96NL0 473 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 KCNC2Q96PR1 638 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 F2RL3Q96RI0 385 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 MAPKAP1Q9BPZ7 522 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 WDR83Q9BRX9 315 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 TMEM79Q9BSE2 394 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 PPANQ9NQ55 473 aaKnown RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 ZNF490Q9ULM2 529 aaPredicted RBP10.63□□□□□ -0.71
FRG1-201ENST00000226798 HIVEP2P31629 2446 aa10.63□□□□□ -0.71
FRG1-201ENST00000226798 MED12Q93074 2177 aa10.62□□□□□ -0.71
FRG1-201ENST00000226798 TUBAL3A6NHL2 446 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms