RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TMEM179BQ7Z7N9 219 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF740Q8NDX6 193 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 NUS1Q96E22 293 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 UGT2A1Q9Y4X1 527 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 A0A1W2PQ09 198 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 REM1O75628 298 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 DNAJB5O75953 348 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 C1GALT1C1LP0DN25 315 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 VIPR1P32241 457 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CCR8P51685 355 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CTSCP53634 463 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 AQP6Q13520 282 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CAMK1Q14012 370 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 LIPJQ5W064 366 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM173Q86WV6 379 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF431Q8TF32 576 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 MUL1Q969V5 352 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CLMPQ9H6B4 373 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TDP1Q9NUW8 608 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 GFRA2O00451 464 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 CA12O43570 354 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SEC14L2O76054 403 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 PIM1P11309 404 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MAP2K3P46734 347 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 ISL1P61371 349 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 BTN3A2P78410 334 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 FAM220AQ7Z4H9 259 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 LINC01465Q8N7H1 131 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 ATP6V1C2Q8NEY4 427 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SCRN2Q96FV2 425 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SLC27A6Q9Y2P4 619 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 HIST1H2ABP04908 130 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 ALAS2P22557 587 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 OR2G6Q5TZ20 316 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 HIST3H2AQ7L7L0 130 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 OR4E2Q8NGC2 313 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 HIST1H2ACQ93077 130 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 RGMAQ96B86 450 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MCHR1Q99705 422 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MRPS30Q9NP92 439 aaKnown RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 Q9Y3F1 56 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 PCDHGA3Q9Y5H0 932 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 LOC100509620A0A075B734 347 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 PLD2O14939 933 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SOX30O94993 753 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MPIP34949 423 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MNDAP41218 407 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 MASP1P48740 699 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 PGDP52209 483 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 NNATQ16517 81 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SLC12A9Q9BXP2 914 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 CPNE5Q9HCH3 593 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 SOHLH2Q9NX45 425 aa13.14□□□□□ -0.31
NFKB1-201ENST00000226574 STOX2Q9P2F5 926 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-201ENST00000226574 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ADH1CP00326 375 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF10P21506 573 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ACSL1P33121 698 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CLCN7P51798 805 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 GP2P55259 537 aaKnown RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 VITQ6UXI7 678 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 NELL2Q99435 816 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 RBCK1Q9BYM8 510 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 MKL2Q9ULH7 1088 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ENPP4Q9Y6X5 453 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 A0A1W2PRG6 482 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PROM1O43490 865 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 IFNGP01579 166 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PYCR1P32322 319 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 SOX2P48431 317 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CBLBQ13191 982 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 HLA-DQA1Q5Y7H0 255 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 FRMPD2BQ6IN97 320 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms