RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 OR2Y1Q8NGV0 311 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 CCDC86Q9H6F5 360 aaKnown RBP25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 NECTIN3Q9NQS3 549 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 PRDM9Q9NQV7 894 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 EHD3Q9NZN3 535 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 SH3BP4Q9P0V3 963 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 TCFL5Q9UL49 500 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 MMACHCQ9Y4U1 282 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 MRPS18BQ9Y676 258 aaKnown RBP25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 A0A1W2PS29 197 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 GABRR3A8MPY1 467 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 TGFBR3LH3BV60 316 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 CTNSO60931 367 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 SLC22A3O75751 556 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 RECKO95980 971 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 CD63P08962 238 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 GPX3P22352 226 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 PTPN4P29074 926 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ATP4BP51164 291 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 PDE7AQ13946 482 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 PRSS53Q2L4Q9 553 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 MED25Q71SY5 747 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ANKRD9Q96BM1 317 aaPredicted RBP25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 GPR87Q9BY21 358 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 SAR1AQ9NR31 198 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ZIM2Q9NZV7 527 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 IL17BQ9UHF5 180 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 UMODP07911 640 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 C8orf89P0DMQ9 161 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 LIFP15018 202 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 IL12AP29459 219 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 RPL3P39023 403 aaKnown RBP25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 CLNS1AP54105 237 aaKnown RBP25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 EMP2P54851 167 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 STX4Q12846 297 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ZNF750Q32MQ0 723 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 PGS1Q32NB8 556 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ZNF385BQ569K4 471 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ERMP1Q7Z2K6 904 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 R3HCC1LQ7Z5L2 792 aaKnown RBP25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 MTDHQ86UE4 582 aaKnown RBP25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 CCDC197Q8NCU1 140 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 OR4K14Q8NGD5 310 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ZBTB18Q99592 522 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 ATP6V1HQ9UI12 483 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 KCND3Q9UK17 655 aa25.59■■□□□ 1.69
CHMP4B-201ENST00000217402 FCHO1O14526 889 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 PIK3R1P27986 724 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 PPP2R1BP30154 601 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 C21orf58P58505 322 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 NSDHLQ15738 373 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 KCNE4Q8WWG9 221 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 STARD8Q92502 1023 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 MTERF3Q96E29 417 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 CLMPQ9H6B4 373 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 CCDC167Q9P0B6 97 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 ARMCX1Q9P291 453 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 PSME2Q9UL46 239 aa25.58■■□□□ 1.69
CHMP4B-201ENST00000217402 GPR75O95800 540 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 PCSK2P16519 638 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 MRPL19P49406 292 aaKnown RBP25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 SRSF6Q13247 344 aaKnown RBP25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 CPTPQ5TA50 214 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 LANCL3Q6ZV70 420 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 CPSF7Q8N684 471 aaKnown RBP25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 ZNF248Q8NDW4 579 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 PRPF18Q99633 342 aaKnown RBP25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 MESP1Q9BRJ9 268 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 SLC35C2Q9NQQ7 365 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 MAPRE3Q9UPY8 281 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 CLDN16Q9Y5I7 305 aa25.57■■□□□ 1.68
CHMP4B-201ENST00000217402 CCDC22O60826 627 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 ALOX12BO75342 701 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 LAMP1P11279 417 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 FEN1P39748 380 aaKnown RBP25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 FAM174BQ3ZCQ3 159 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 AGKQ53H12 422 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 SPANXN4Q5MJ08 99 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 SNIP1Q8TAD8 396 aaKnown RBP25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 CIDECQ96AQ7 238 aaPredicted RBP25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 TESCQ96BS2 214 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 CNRIP1Q96F85 164 aaPredicted RBP25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 TMEM121BQ9BXQ6 578 aaPredicted RBP25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 ENTPD4Q9Y227 616 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 PCDHGA6Q9Y5G7 932 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 ZNF780BQ9Y6R6 833 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 CCDC88CQ9P219 2028 aa25.56■■□□□ 1.68
CHMP4B-201ENST00000217402 IGKV3D-11A0A0A0MRZ8 115 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 EFNA1P20827 205 aaPredicted RBP25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 XKP51811 444 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 IRX1P78414 480 aaPredicted RBP25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 METTL21AQ8WXB1 218 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 ALOXE3Q9BYJ1 711 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 GIMAP4Q9NUV9 329 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 DKK4Q9UBT3 224 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 TBX19O60806 448 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 CD1EP15812 388 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 POLR2JP52435 117 aaKnown RBP25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 DGKQP52824 942 aa25.55■■□□□ 1.68
CHMP4B-201ENST00000217402 MPEG1Q2M385 716 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms