RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 REEP3Q6NUK4 255 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SLC48A1Q6P1K1 146 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ZFP28Q8NHY6 868 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SPPL2AQ8TCT8 520 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 CNRIP1Q96F85 164 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 CDX2Q99626 313 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SERHL2Q9H4I8 314 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 HRASLS2Q9NWW9 162 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SAMHD1Q9Y3Z3 626 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 METTL12A8MUP2 240 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 NDUFS2O75306 463 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SMIM10L1P0DMW3 83 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 PVRP15151 417 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 JUNDP17535 347 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 TNFRSF1BP20333 461 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 GPC1P35052 558 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 PIGAP37287 484 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 DUSP2Q05923 314 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 KCNAB2Q13303 367 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 TP53BP2Q13625 1128 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ZNF750Q32MQ0 723 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 TTC23Q5W5X9 447 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SUN3Q8TAQ9 357 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ZDHHC1Q8WTX9 485 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SLC38A5Q8WUX1 472 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 THAP11Q96EK4 314 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 NRBF2Q96F24 287 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SMIM10Q96HG1 83 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 MYCBPQ99417 103 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 GRIP2Q9C0E4 1043 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 REEP1Q9H902 201 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ZSCAN32Q9NX65 697 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 WNT16Q9UBV4 365 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 CCDC88CQ9P219 2028 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 LOC105369274A0A096LPK9 316 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 LOC102723532A0A0G2JNH3 316 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 TRIM64A6NGJ6 449 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 HMGN4O00479 90 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 IFNA14P01570 189 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 TFPTP0C1Z6 253 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 CD27P26842 260 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 RXRGP48443 463 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 RELAQ04206 551 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 FRMPD2BQ6IN97 320 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 CYP4Z1Q86W10 505 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 ZNF761Q86XN6 746 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 OR4N4Q8N0Y3 316 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 FAM46DQ8NEK8 389 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 ZNF555Q8NEP9 628 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 BAHD1Q8TBE0 780 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 RAB8BQ92930 207 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 EPB41L1Q9H4G0 881 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 NDUFAF4Q9P032 175 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 C3orf18Q9UK00 162 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 FBXL21Q9UKT6 434 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
RABGGTA-201ENST00000216840 A0A0J9YY10 115 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 A0A1W2PR77 199 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 SH3BP5O60239 455 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 BCHEP06276 602 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 DAPP51397 102 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 RAD23AP54725 363 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 NR1H2P55055 460 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 CDH15P55291 814 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 HHEXQ03014 270 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 MAPK11Q15759 364 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 RFX4Q33E94 735 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 ZC3H12BQ5HYM0 836 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 RPS26P11Q5JNZ5 115 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 CCDC116Q8IYX3 515 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 ZCCHC10Q8TBK6 192 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 TMEM19Q96HH6 336 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 SHDQ96IW2 340 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 SLC35G5Q96KT7 338 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 EPYCQ99645 322 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 ZFYVE21Q9BQ24 234 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 THUMPD1Q9NXG2 353 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 ENTPD4Q9Y227 616 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 CEP192Q8TEP8 1941 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 SMIM31A0A1B0GVY4 71 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 A0A1W2PS29 197 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 MITFO75030 526 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 C9P02748 559 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 C8orf89P0DMQ9 161 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 PTGER1P34995 402 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 OR1E2P47887 323 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 KDM4DQ6B0I6 523 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 TMEM64Q6YI46 380 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 SMYD1Q8NB12 490 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 CAMKVQ8NCB2 501 aa16.28■□□□□ 0.2
RABGGTA-201ENST00000216840 KLHL6Q8WZ60 621 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms