RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PATE3B3GLJ2 98 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 SRPX2O60687 465 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 ERAL1O75616 437 aaKnown RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 TIPRLO75663 272 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 NR2F6P10588 404 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 IL10P22301 178 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 PEX2P28328 305 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 CHI3L1P36222 383 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 CDK9P50750 372 aaKnown RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 OLR1P78380 273 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 CFHR1Q03591 330 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 NR1D2Q14995 579 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 ZNF750Q32MQ0 723 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 AMZ1Q400G9 498 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 MTX3Q5HYI7 312 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 ARHGEF39Q8N4T4 335 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 OR52E4Q8NGH9 312 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 OR52N2Q8NGI0 321 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 NCLNQ969V3 563 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 FAM162AQ96A26 154 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 CNRIP1Q96F85 164 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 AMDHD1Q96NU7 426 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 CD180Q99467 661 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 EPS8L2Q9H6S3 715 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 GAREM1Q9H706 876 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 NEUROD4Q9HD90 331 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 SIRT3Q9NTG7 399 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-209ENST00000641074 PHF11Q9UIL8 331 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 DAPP1Q9UN19 280 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 NAALAD2Q9Y3Q0 740 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 SLC22A7Q9Y694 548 aa17.24■□□□□ 0.35
PHGDH-209ENST00000641074 RNF103-CHMP3A0A140T963 221 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 SP9P0CG40 484 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 CPN2P22792 545 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 HOXD12P35452 270 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 MLLT3P42568 568 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 CRATP43155 626 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 GABRA4P48169 554 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 TNFRSF17Q02223 184 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 MAP7Q14244 749 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 PRTGQ2VWP7 1150 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 ERICH5Q6P6B1 374 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 RNF130Q86XS8 419 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 PSMA8Q8TAA3 256 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 BBS4Q96RK4 519 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 SEPHS2Q99611 448 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 SPATA9Q9BWV2 254 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 EPB41L1Q9H4G0 881 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 CAPN10Q9HC96 672 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 SOHLH2Q9NX45 425 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 RAPGEFL1Q9UHV5 662 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 C15orf41Q9Y2V0 281 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 MAP4K5Q9Y4K4 846 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 A0A1W2PS29 197 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 MYO1GB0I1T2 1018 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 DUX1O43812 170 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 GALR3O60755 368 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 KRT75O95678 551 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 RETP07949 1114 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 ETFAP13804 333 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 CD1CP29017 333 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 NTSP30990 170 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 BUD31P41223 144 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 NCBP2P52298 156 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 DUSP2Q05923 314 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 ZNF528Q3MIS6 628 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 OGFRL1Q5TC84 451 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 USP53Q70EK8 1073 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 KBTBD2Q8IY47 623 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 ZBTB44Q8NCP5 570 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 PAPD5Q8NDF8 572 aaKnown RBP17.23■□□□□ 0.35
PHGDH-209ENST00000641074 OR4C6Q8NH72 309 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 C10orf90Q96M02 699 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 CSF3RQ99062 836 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 LYRM4Q9HD34 91 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 PDE7BQ9NP56 450 aa17.23■□□□□ 0.35
PHGDH-209ENST00000641074 TXNDC9O14530 226 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 CASC3O15234 703 aaKnown RBP17.22■□□□□ 0.35
PHGDH-209ENST00000641074 HNRNPRO43390 633 aaKnown RBP17.22■□□□□ 0.35
PHGDH-209ENST00000641074 TPST1O60507 370 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 TNFRSF21O75509 655 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 ZBTB11O95625 1053 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-209ENST00000641074 C8orf89P0DMQ9 161 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 ALPPL2P10696 532 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 CSF2RBP32927 897 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 FEN1P39748 380 aaKnown RBP17.22■□□□□ 0.35
PHGDH-209ENST00000641074 GPLD1P80108 840 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 HMBOX1Q6NT76 420 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 PLXDC1Q8IUK5 500 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 TMEM126BQ8IUX1 230 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 CCDC116Q8IYX3 515 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 SHISA5Q8N114 240 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 FAM86B1Q8N7N1 296 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 OR5T3Q8NGG3 340 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 OR2I1PQ8NGU4 316 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 CEP76Q8TAP6 659 aa17.22■□□□□ 0.35
PHGDH-209ENST00000641074 SUN3Q8TAQ9 357 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms