RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 GIMD1P0DJR0 217 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 GSTM4Q03013 218 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 EIF4HQ15056 248 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RUNDC3AQ59EK9 446 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM107Q6UX40 140 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 ADGRD2Q7Z7M1 963 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 LINC00471Q8N535 108 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 LKAAEAR1Q8TD35 194 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 HEBP1Q9NRV9 189 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 MKLN1Q9UL63 735 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 COL4A1P02462 1669 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 MAGEB3O15480 346 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RGNQ15493 299 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 NUP43Q8NFH3 380 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RAB7BQ96AH8 199 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 CIDECQ96AQ7 238 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 NTMT1Q9BV86 223 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 CKLFQ9UBR5 152 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 A8MU76 341 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 EIF3FO00303 357 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 ARNTLO00327 626 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 CBLP22681 906 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF267Q14586 743 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 SLC27A4Q6P1M0 643 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF676Q8N7Q3 588 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 OR8H1Q8NGG4 311 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 NKD1Q969G9 470 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 OR2M4Q96R27 311 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 GPER1Q99527 375 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 MAGIXQ9H6Y5 334 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 C14orf119Q9NWQ9 140 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 LAMB1P07942 1786 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 FCER2P06734 321 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 CNR2P34972 360 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 GNALP38405 381 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 SIM1P81133 766 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 TSTD1Q8NFU3 115 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 OR52N2Q8NGI0 321 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 SETD7Q8WTS6 366 aaKnown RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 NUDT8Q8WV74 236 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 NCSTNQ92542 709 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 MMP27Q9H306 513 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 IL20RAQ9UHF4 553 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 BLOC1S5-TXNDC5H3BN57 136 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 M0R129 80 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 KRT33AO76009 404 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 UBXN7O94888 489 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 TNFP01375 233 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 HOXD8P13378 290 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 VEGFBP49765 207 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 GBX2P52951 348 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 CD83Q01151 205 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 SPHARQ15513 63 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 GRHL2Q6ISB3 625 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 LIPIQ6XZB0 460 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 METTL27Q8N6F8 245 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 ZFP41Q8N8Y5 198 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 LRR1Q96L50 414 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 MACROD1Q9BQ69 325 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 TBL1XR1Q9BZK7 514 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 BHLHE41Q9C0J9 482 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-216ENST00000639300 MARK1Q9P0L2 795 aa13.79□□□□□ -0.2
SCARB2-216ENST00000639300 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ANXA2P2A6NMY6 339 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 BOLA2-SMG1P6H3BVE0 249 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ANXA2P07355 339 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF3P17036 446 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 RHCEP18577 417 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GSTM2P28161 218 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 MASP1P48740 699 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 RPS21P63220 83 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 HNRNPA0Q13151 305 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 FAM214AQ32MH5 1076 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 HTR3DQ70Z44 454 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 LINGO2Q7L985 606 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 C1orf216Q8TAB5 229 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 KCNN1Q92952 543 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 DNAJA3Q96EY1 480 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GPR78Q96P69 363 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 DGAT2Q96PD7 388 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SLC22A4Q9H015 551 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 VILLO15195 856 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 KLF8O95600 359 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 MRPL3P09001 348 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms