RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 EPHX3Q9H6B9 360 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 EXOSC4Q9NPD3 245 aaKnown RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 MIEF1Q9NQG6 463 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 SEC14L4Q9UDX3 406 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 TBC1D24Q9ULP9 559 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 MGAT4BQ9UQ53 548 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 N6AMT1Q9Y5N5 214 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 TRBV4-1A0A0J9YWV2 114 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 IL3P08700 152 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 LIM2P55344 173 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 NCF4Q15080 339 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 CLPPQ16740 277 aaPredicted RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 NXPE4Q6UWF7 544 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 AP2M1Q96CW1 435 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMEM80Q96HE8 168 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR2A14Q96R47 310 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 IL4I1Q96RQ9 567 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 CNPPD1Q9BV87 410 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 C11orf16Q9NQ32 467 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 REV1Q9UBZ9 1251 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 UGT2B17O75795 530 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 IER5LQ5T953 404 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR8H2Q8N162 312 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF557Q8N988 423 aaPredicted RBP19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR9A1PQ8NGU1 263 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 UBE2E3Q969T4 207 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 ASAH2Q9NR71 780 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 TAAR2Q9P1P5 351 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 MYOFQ9NZM1 2061 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 ANKRD34BA5PLL1 514 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 C5orf58C9J3I9 102 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 FAM227AF5H4B4 570 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 SSX4O60224 188 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 PQBP1O60828 265 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 PSMA1P25786 263 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 RPS19P39019 145 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 SPHARQ15513 63 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 ERAP2Q6P179 960 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 CEACAM20Q6UY09 585 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 MND1Q9BWT6 205 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 CXorf36Q9H7Y0 433 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 A4GALTQ9NPC4 353 aa19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 ABT1Q9ULW3 272 aaKnown RBP19.16■□□□□ 0.66
SYNGAP1-227ENST00000638142 CENPBD1B2RD01 187 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 CAPN5O15484 640 aaPredicted RBP19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 CSO75390 466 aaKnown RBP19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 RORCP51449 518 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 TAP2Q03519 686 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 LEXMQ3ZCV2 418 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 BCL7AQ4VC05 210 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 ATAD3CQ5T2N8 411 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 RNLSQ5VYX0 342 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 WDFY2Q96P53 400 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 NDEL1Q9GZM8 345 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 SPNS1Q9H2V7 528 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 CCL26Q9Y258 94 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 RPL36Q9Y3U8 105 aaKnown RBP19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 PCDHGB2Q9Y5G2 931 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 RGS5O15539 181 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 TGM5O43548 720 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 ELFN1P0C7U0 828 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 MMP12P39900 470 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 SOX3P41225 446 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 FOXD4Q12950 439 aaPredicted RBP19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF805Q5CZA5 627 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 C12orf73Q69YU5 71 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 LRRC56Q8IYG6 542 aaPredicted RBP19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC34A3Q8N130 599 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 CD99L2Q8TCZ2 262 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 NEURL3Q96EH8 262 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 PPP1R16AQ96I34 528 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 BARHL1Q9BZE3 327 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 STUB1Q9UNE7 303 aa19.15■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF670-ZNF695F2Z2N8 137 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 FAAHO00519 579 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 MEF2AQ02078 507 aaPredicted RBP19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 DCST1Q5T197 706 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 SAXO2Q658L1 398 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 LIPIQ6XZB0 460 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMPRSS11AQ6ZMR5 421 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 CFAP206Q8IYR0 622 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 NRSN1Q8IZ57 195 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 IL17RCQ8NAC3 791 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC38A5Q8WUX1 472 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 MYLIPQ8WY64 445 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 DHRS1Q96LJ7 313 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 DNAJC27Q9NZQ0 273 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 DKK3Q9UBP4 350 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 IL36AQ9UHA7 158 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 V9GYH0 126 aa19.14■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC35F4A4IF30 521 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 PDE9AO76083 593 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 BCHEP06276 602 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 CTSLP07711 333 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 ELAVL4P26378 380 aaKnown RBP19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 CRYBB2P43320 205 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 DGKGP49619 791 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 GPR50Q13585 617 aa19.14■□□□□ 0.65
SYNGAP1-227ENST00000638142 CASP12Q6UXS9 341 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms