RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PHF11Q9UIL8 331 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 PCTPQ9UKL6 214 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 A0A1B0GUH1 482 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 ASPDHA6ND91 283 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 PRKNO60260 465 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 NME2P1O60361 137 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 MLYCDO95822 493 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 FAM153BP0C7A2 387 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 NME2P22392 152 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 GPR143P51810 404 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 RBPJQ06330 500 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 FAM153CQ494X1 144 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 TTC19Q6DKK2 380 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 MAMDC2Q7Z304 686 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 GPR180Q86V85 440 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 FJX1Q86VR8 437 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 OR4N5Q8IXE1 308 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 ZCCHC7Q8N3Z6 543 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 MORN4Q8NDC4 146 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 PTPMT1Q8WUK0 201 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 SREK1Q8WXA9 508 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 ANKRD9Q96BM1 317 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 MTFMTQ96DP5 389 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 OR8D2Q9GZM6 311 aa15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 TSPAN10Q9H1Z9 355 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 RPF2Q9H7B2 306 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 TRIM45Q9H8W5 580 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 LIN28AQ9H9Z2 209 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 SEMA4BQ9NPR2 832 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-259ENST00000638114 TRGV8A0A0C4DH27 118 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 C17orf105B2RV13 164 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 FOXE1O00358 373 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 FGF17O60258 216 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 EEDO75530 441 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 WISP2O76076 250 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ETHE1O95571 254 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 CLDN1O95832 211 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 COX7A2P14406 83 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 GCAP28676 217 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 TLX1P31314 330 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 SSR4P51571 173 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ARFIP1P53367 373 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 HNRNPH2P55795 449 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 TNFRSF17Q02223 184 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 TRAF3Q13114 568 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 CUL3Q13618 768 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 TEX35Q5T0J7 233 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 C18orf63Q68DL7 685 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ADGRD1Q6QNK2 874 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 HSDL2Q6YN16 418 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 C16orf47Q6ZP98 133 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ZNF227Q86WZ6 799 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 CYP4Z2PQ8N1L4 340 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 MTBPQ96DY7 904 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 DGAT2Q96PD7 388 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 NTMT1Q9BV86 223 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ZBTB26Q9HCK0 441 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 LYARQ9NX58 379 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 YARS2Q9Y2Z4 477 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 ATG4BQ9Y4P1 393 aa15.59■□□□□ 0.09
CACNA1A-259ENST00000638114 A8MT66 165 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 NPIPA5E9PKD4 350 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 ZG16O60844 167 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 PRKRAO75569 313 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 RPS17P08708 135 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 ZNF24P17028 368 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 BSGP35613 385 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 BUD31P41223 144 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 IFT88Q13099 833 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 SLC29A2Q14542 456 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 FRG2Q64ET8 278 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 CYP20A1Q6UW02 462 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 TIFABQ6ZNK6 161 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 RPS27LQ71UM5 84 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 MILR1Q7Z6M3 343 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 NUDT13Q86X67 352 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 GSPT2Q8IYD1 628 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 CPSF7Q8N684 471 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 ZNF321PQ8N8H1 164 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 LRRN4CLQ8ND94 238 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 C7orf57Q8NEG2 295 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 SLC2A12Q8TD20 617 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 TANKQ92844 425 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 GPR137Q96N19 417 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 FRG2BQ96QU4 278 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 SERPINI1Q99574 410 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 ZNF717Q9BY31 904 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 DDX31Q9H8H2 851 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 PSD3Q9NYI0 1048 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 COPS7AQ9UBW8 275 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 SH3BGRL2Q9UJC5 107 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 NPIPA1Q9UND3 350 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 ERVK-11Q9UQG0 969 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 KLF13Q9Y2Y9 288 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 CROCCQ5TZA2 2017 aa15.58■□□□□ 0.08
CACNA1A-259ENST00000638114 NBPF19A0A087WUL8 3843 aa15.57■□□□□ 0.08
CACNA1A-259ENST00000638114 A0A0A6YYD5 115 aa15.57■□□□□ 0.08
CACNA1A-259ENST00000638114 IQANK1A0A1B0GTG1 560 aa15.57■□□□□ 0.08
CACNA1A-259ENST00000638114 TMEM200CA6NKL6 621 aa15.57■□□□□ 0.08
CACNA1A-259ENST00000638114 A8MVJ9 347 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms