RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TRAF3Q13114 568 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TERF2Q15554 542 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 ELAVL1Q15717 326 aaKnown RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 MAMDC2Q7Z304 686 aaPredicted RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 MDGA2Q7Z553 956 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TMEM151AQ8N4L1 468 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 L3MBTL4Q8NA19 623 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TMEM178AQ8NBL3 297 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 SRFBP1Q8NEF9 429 aaKnown RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 PPWD1Q96BP3 646 aaKnown RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 OR8D2Q9GZM6 311 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 ROGDIQ9GZN7 287 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TSPYL1Q9H0U9 437 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 EPB41L4BQ9H329 900 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TRIM45Q9H8W5 580 aaPredicted RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 VTI1BQ9UEU0 232 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 PCDHGB6Q9Y5F9 930 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 NOTCH2Q04721 2471 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 A0A1W2PS29 197 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 CCDC189A1A4V9 331 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 GLOD5A6NK44 160 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 C17orf105B2RV13 164 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 HRKO00198 91 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 WWP2O00308 870 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 FCHO1O14526 889 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 RIPK2O43353 540 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 ZNF354AO60765 605 aaPredicted RBP16.48■□□□□ 0.23
PNKP-230ENST00000638016 OR2J2O76002 312 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 KRT38O76015 456 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 MYBL2P10244 700 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 SERPINB1P30740 379 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 BSGP35613 385 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 NR0B1P51843 470 aaKnown RBP16.48■□□□□ 0.23
PNKP-230ENST00000638016 GPR85P60893 370 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 ALDH6A1Q02252 535 aaKnown RBP16.48■□□□□ 0.23
PNKP-230ENST00000638016 TAOK1Q7L7X3 1001 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 SIAH3Q8IW03 269 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 SLC2A12Q8TD20 617 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 RGMAQ96B86 450 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 SEMA4BQ9NPR2 832 aaPredicted RBP16.48■□□□□ 0.23
PNKP-230ENST00000638016 TINAGQ9UJW2 476 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 PCDHGA11Q9Y5H2 935 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 TNPO3Q9Y5L0 923 aaKnown RBP16.48■□□□□ 0.23
PNKP-230ENST00000638016 CLCA3PQ9Y6N3 262 aa16.48■□□□□ 0.23
PNKP-230ENST00000638016 A0A0A6YYD5 115 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 A8MT66 165 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 FOXO6A8MYZ6 492 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 UGDHO60701 494 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 RBP1P09455 135 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TNNI3P19429 210 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 MEOX1P50221 254 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 HK2P52789 917 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 CDH13P55290 713 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TNFRSF17Q02223 184 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 FOLH1Q04609 750 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 RCN2Q14257 317 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 C3AR1Q16581 482 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 NCCRP1Q6ZVX7 275 aaPredicted RBP16.47■□□□□ 0.23
PNKP-230ENST00000638016 CYP4Z2PQ8N1L4 340 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TMEM132CQ8N3T6 1108 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TMEM156Q8N614 296 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 ATP6V1E2Q96A05 226 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 GPR137Q96N19 417 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TXLNGYQ9BZA5 131 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 FARSBQ9NSD9 589 aaKnown RBP16.47■□□□□ 0.23
PNKP-230ENST00000638016 TMEM216Q9P0N5 145 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 TSC22D4Q9Y3Q8 395 aa16.47■□□□□ 0.23
PNKP-230ENST00000638016 A0A0G2JMM0 328 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 A0A1W2PPB8 328 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 A0A1W2PR48 441 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 A0A1W2PRS3 328 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 PINLYPA6NC86 204 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 KIR3DP1A8MWS1 328 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 GOLGA8RI6L899 631 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 STX16O14662 325 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ZFAND5O76080 213 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 OR6B1O95007 311 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 CLDN9O95484 217 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 TUBB4AP04350 444 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 RPS17P08708 135 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 ABHD2P08910 425 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 SNRPAP09012 282 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 SOX3P41225 446 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 CCNG1P51959 295 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 IGLV3-21P80748 117 aaPredicted RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 MRM1Q6IN84 353 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 GPR180Q86V85 440 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 SULF2Q8IWU5 870 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 CHERPQ8IWX8 916 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 IFT20Q8IY31 132 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 HORMAD2Q8N7B1 307 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 OR4F6Q8NGB9 312 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 OR14A16Q8NHC5 309 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ZNF721Q8TF20 911 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 RELTQ969Z4 430 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms