RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SYBUQ9NX95 663 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 MTMR10Q9NXD2 777 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 SLC2A8Q9NY64 477 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 NYAP2Q9P242 653 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 UVRAGQ9P2Y5 699 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 XPR1Q9UBH6 696 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ABCD2Q9UBJ2 740 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 C3orf18Q9UK00 162 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ABCG2Q9UNQ0 655 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 GPR132Q9UNW8 380 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 FOXA2Q9Y261 457 aaPredicted RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 STARD10Q9Y365 291 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 GRIP1Q9Y3R0 1128 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 HYOU1Q9Y4L1 999 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 STK36Q9NRP7 1315 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 SALL1Q9NSC2 1324 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ATRNL1Q5VV63 1379 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 NEURL4Q96JN8 1562 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TRAV26-1A0A087WT03 109 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 LOC105369274A0A096LPK9 316 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 LOC102723532A0A0G2JNH3 316 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TCRBV5S2A0A599 114 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 GXYLT2A0PJZ3 443 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 CBY3A6NI87 242 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MBD3L5A6NJ08 208 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 A8MUA0 341 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 SERPINE3A8MV23 424 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 SMLR1H3BR10 107 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 LIN7AO14910 233 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 KIAA0391O15091 583 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 CHUKO15111 745 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 BET1O15155 118 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MID1O15344 667 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 NME2P1O60361 137 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 NRP2O60462 931 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TSPAN2O60636 221 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MAGEC1O60732 1142 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 PFDN1O60925 122 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FCGR3BO75015 233 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 NOS1APO75052 506 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 SDC3O75056 442 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 GMNNO75496 209 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 SLC25A12O75746 678 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TM7SF2O76062 418 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 HAUS5O94927 633 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 NADKO95544 446 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 MPIG6BO95866 241 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 KNG1P01042 644 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FTH1P02794 183 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 CRYGBP07316 175 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 CA3P07451 260 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ERCC1P07992 297 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 OCMP0CE72 109 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 GIMD1P0DJR0 217 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 RRASP10301 218 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 LYL1P12980 280 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TPSB2P20231 275 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MSH3P20585 1137 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 GSTM3P21266 225 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 DTYMKP23919 212 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 TEAD1P28347 426 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 OR1E1P30953 314 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FMO4P31512 558 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 SLC6A6P31641 620 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 SLC8A1P32418 973 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 PTGER4P35408 488 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 THBS4P35443 961 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TMPOP42166 694 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 SLC1A1P43005 524 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MAGEA2P43356 314 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 STK19P49842 368 aaPredicted RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 PPT1P50897 306 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 P2RY4P51582 365 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 RIDAP52758 137 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 NDST1P52848 882 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 CACNA2D1P54289 1103 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 PSMD4P55036 377 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 SLC37A1P57057 533 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ATP6V0D1P61421 351 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ARF6P62330 175 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 GNAI1P63096 354 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MRPS21P82921 87 aaKnown RBP2.84□□□□□ -1.95
VIM-210ENST00000637053 MXRA7P84157 204 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ROM1Q03395 351 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 EGR4Q05215 589 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 CHRNB3Q05901 458 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FGL1Q08830 312 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FCHO2Q0JRZ9 810 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 FUT7Q11130 342 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 DUSP8Q13202 625 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ITGADQ13349 1161 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 PON3Q15166 354 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 TPSAB1Q15661 275 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 NAB2Q15742 525 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 STXBP2Q15833 593 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 MST1LQ2TV78 715 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 XKR6Q5GH73 641 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ZNF618Q5T7W0 954 aa2.84□□□□□ -1.95
VIM-210ENST00000637053 ZNF691Q5VV52 312 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms