RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 LINC01555Q8NAE3 123 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 OR2T12Q8NG77 320 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 OMA1Q96E52 524 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 DGCR6LQ9BY27 220 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 BRF2Q9HAW0 419 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 HMG20AQ9NP66 347 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SLC35C2Q9NQQ7 365 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SH3BP4Q9P0V3 963 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 DNMT3AQ9Y6K1 912 aaPredicted RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SHISA7A6NL88 538 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 GABRR3A8MPY1 467 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PCDH7O60245 1069 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 MAN1A2O60476 641 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 STATHP02808 62 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 IL10P22301 178 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 FASP25445 335 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 MC1RQ01726 317 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SLC14A1Q13336 389 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ADPRMQ3LIE5 342 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 POMZP3Q6PJE2 187 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 TMIGD1Q6UXZ0 262 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ZNF621Q6ZSS3 439 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SLCO6A1Q86UG4 719 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ZNF565Q8N9K5 539 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 OR8J3Q8NGG0 315 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 CCL4L1Q8NHW4 92 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PNPT1Q8TCS8 783 aaKnown RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 FAM3CQ92520 227 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 HTRA1Q92743 480 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 TESCQ96BS2 214 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 C11orf24Q96F05 449 aaPredicted RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 PDXPQ96GD0 296 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ITCHQ96J02 903 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 TXNDC15Q96J42 360 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PANX1Q96RD7 426 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 C1QTNF7Q9BXJ2 289 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 KCNH6Q9H252 994 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 DMRT3Q9NQL9 472 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ZNF639Q9UID6 485 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ACSL5Q9ULC5 683 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 SLC17A4Q9Y2C5 497 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 NPIPB8E9PQR5 432 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 CCRL2O00421 344 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 GSTA4O15217 222 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 RETP07949 1114 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 TGFBR1P36897 503 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 MRPS21P82921 87 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 PCDH1Q08174 1060 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 Q3ZCU0 254 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 COMMD6Q7Z4G1 85 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 ADCK2Q7Z695 626 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 STK32CQ86UX6 486 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 MINDY2Q8NBR6 621 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 SETD7Q8WTS6 366 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 REPS1Q96D71 796 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 NSMCE2Q96MF7 247 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 RNF145Q96MT1 663 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 MENTQ9BUN1 341 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 C8orf33Q9H7E9 229 aaPredicted RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 IL33O95760 270 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 RPN2P04844 631 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 GABRG2P18507 467 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 M6PRP20645 277 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 PCMT1P22061 227 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 GSTM2P28161 218 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 PRKAR1BP31321 381 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 WNT3P56703 355 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 CTU2Q2VPK5 515 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 LCTLQ6UWM7 567 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 VN1R5Q7Z5H4 357 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 AKAP14Q86UN6 197 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 LAS2Q8IYD9 372 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 TBC1D21Q8IYX1 336 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 OR10Q1Q8NGQ4 319 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 CAMK1GQ96NX5 476 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 SECISBP2Q96T21 854 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 WDR12Q9GZL7 423 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 A0A1W2PPV9 198 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 PRSS38A1L453 326 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 UPK1AO00322 258 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 FPGTO14772 594 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 EML2O95834 649 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 KLK1P06870 262 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 HSD3B1P14060 373 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 IDSP22304 550 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 HSD3B2P26439 372 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 PTPN6P29350 595 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 RACK1P63244 317 aaKnown RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 COL9A2Q14055 689 aaPredicted RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
CLN6-217ENST00000636964 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLN6-217ENST00000636964 BROXQ5VW32 411 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 FAM86B1Q8N7N1 296 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 TRPV3Q8NET8 790 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 FBXO30Q8TB52 745 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms