RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 NPEPPSL1A6NEC2 478 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 E7ENX8 843 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 I3L1I5 382 aaPredicted RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 CDC7O00311 574 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 FFAR3O14843 346 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 AZIN1O14977 448 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 UBDO15205 165 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 GPR42O15529 346 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 RASAL1O95294 804 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 PSMG1O95456 288 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 WDPCPO95876 746 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 SLC16A8O95907 504 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 CRYABP02511 175 aaKnown RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 CYC1P08574 325 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 RPS17P08708 135 aaKnown RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 ITGAMP11215 1152 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 GNAZP19086 355 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 GCKP35557 465 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 RGS4P49798 205 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ACTR3P61158 418 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 TAP2Q03519 686 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 CLCQ05315 142 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 LCP2Q13094 533 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 PCOLCEQ15113 449 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ABHD17BQ5VST6 288 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 PGM2L1Q6PCE3 622 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ADAMTSL2Q86TH1 951 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 GPSM1Q86YR5 675 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ZC3H7AQ8IWR0 971 aaKnown RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 GIMAP7Q8NHV1 300 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ZNF480Q8WV37 535 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 EEF1AKMT1Q8WVE0 214 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 ASB11Q8WXH4 323 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 SYNPO2LQ9H987 977 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 MID1IP1Q9NPA3 183 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 NUDT4Q9NZJ9 180 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 STOML1Q9UBI4 398 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 SUCOQ9UBS9 1254 aaKnown RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 NKX1-2Q9UD57 310 aaPredicted RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 TEKT2Q9UIF3 430 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 MKL2Q9ULH7 1088 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 KLF2Q9Y5W3 355 aaPredicted RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 MYO7BQ6PIF6 2116 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 H0YIG0 161 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 PRAMEF2O60811 474 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 FKBP6O75344 327 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 SIX3O95343 332 aaPredicted RBP11.88□□□□□ -0.51
CTSD-208ENST00000636843 MLYCDO95822 493 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 HRH2P25021 359 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 AVPR1BP47901 424 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 CDH13P55290 713 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 TBL3Q12788 808 aaKnown RBP11.88□□□□□ -0.51
CTSD-208ENST00000636843 UGT3A2Q3SY77 523 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 KANK2Q63ZY3 851 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 TMEM198Q66K66 360 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 MTFR2Q6P444 385 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 RPS27LQ71UM5 84 aaKnown RBP11.88□□□□□ -0.51
CTSD-208ENST00000636843 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 CPNE9Q8IYJ1 553 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 ZNF483Q8TF39 744 aaPredicted RBP11.88□□□□□ -0.51
CTSD-208ENST00000636843 METTL21AQ8WXB1 218 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 IMMP1LQ96LU5 166 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 SERPINI1Q99574 410 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 EFCAB1Q9HAE3 211 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 TNFRSF12AQ9NP84 129 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 PFDN4Q9NQP4 134 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
CTSD-208ENST00000636843 IKZF3Q9UKT9 509 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 C15orf41Q9Y2V0 281 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 HEATR5BQ9P2D3 2071 aa11.88□□□□□ -0.51
CTSD-208ENST00000636843 OR5H15A6NDH6 313 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 GFYI3L273 518 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 HAT1O14929 419 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 S100BP04271 92 aaPredicted RBP11.87□□□□□ -0.51
CTSD-208ENST00000636843 CELA2AP08217 269 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 C8orf89P0DMQ9 161 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 ENO3P13929 434 aaPredicted RBP11.87□□□□□ -0.51
CTSD-208ENST00000636843 PRF1P14222 555 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 ELAVL4P26378 380 aaKnown RBP11.87□□□□□ -0.51
CTSD-208ENST00000636843 NUDT2P50583 147 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 STX5Q13190 355 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 RCN1Q15293 331 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 CLEC6AQ6EIG7 209 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 AAGABQ6PD74 315 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 LARP4Q71RC2 724 aaKnown RBP eCLIP11.87□□□□□ -0.512e-20■■□□□ 14.3
CTSD-208ENST00000636843 HOMEZQ8IX15 550 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTSD-208ENST00000636843 FBXW8Q8N3Y1 598 aa11.87□□□□□ -0.51
CTSD-208ENST00000636843 PPFIBP2Q8ND30 876 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms