RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 TMEM102Q8N9M5 508 aaPredicted RBP17.55■□□□□ 0.4
PNKP-224ENST00000631020 STT3BQ8TCJ2 826 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 FKBP10Q96AY3 582 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 TUBGCP3Q96CW5 907 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 TRIM55Q9BYV6 548 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 TRIM4Q9C037 500 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 FAM107BQ9H098 131 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 WDR55Q9H6Y2 383 aaPredicted RBP17.55■□□□□ 0.4
PNKP-224ENST00000631020 AKTIPQ9H8T0 292 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 ZNF282Q9UDV7 671 aaPredicted RBP17.55■□□□□ 0.4
PNKP-224ENST00000631020 ATG4BQ9Y4P1 393 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 ASB4Q9Y574 426 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 CEACAM4O75871 244 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 BMP10O95393 424 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 FAM58BPP0C7Q3 252 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 PRR35P0CG20 571 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 XCR1P46094 333 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 RRADP55042 308 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 GALNTL6Q49A17 601 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 SLC9B1Q4ZJI4 515 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 PAGE2Q7Z2X7 111 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 RAB43Q86YS6 212 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 ZC3H7AQ8IWR0 971 aaKnown RBP17.54■□□□□ 0.4
PNKP-224ENST00000631020 LRRC34Q8IZ02 419 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 FCRL1Q96LA6 429 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 TGIF2Q9GZN2 237 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 LYRM4Q9HD34 91 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 MKKSQ9NPJ1 570 aaPredicted RBP17.54■□□□□ 0.4
PNKP-224ENST00000631020 PFDN4Q9NQP4 134 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 FGFR1OP2Q9NVK5 253 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 RIC8BQ9NVN3 520 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 GPN3Q9UHW5 284 aaPredicted RBP17.54■□□□□ 0.4
PNKP-224ENST00000631020 FBXW2Q9UKT8 454 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 DLGAP4Q9Y2H0 992 aa17.54■□□□□ 0.4
PNKP-224ENST00000631020 OR2W5A6NFC9 320 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 ARGFXA6NJG6 315 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 TRPC5OSA6NMA1 111 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 CYR61O00622 381 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 DNAJB5O75953 348 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 VIMP08670 466 aaKnown RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 ZGLP1P0C6A0 271 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 RNH1P13489 461 aaKnown RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 ALOX15P16050 662 aaPredicted RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 EPHA3P29320 983 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 TIA1P31483 386 aaKnown RBP eCLIP17.53■□□□□ 0.4
PNKP-224ENST00000631020 EFNA3P52797 238 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 SSPNQ14714 243 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 ATP6AP1LQ52LC2 224 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 NOXRED1Q6NXP6 359 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 CYP20A1Q6UW02 462 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 EPGNQ6UW88 154 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 SHISA6Q6ZSJ9 500 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.4
PNKP-224ENST00000631020 GPR180Q86V85 440 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 TEX19Q8NA77 164 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 TMEM52Q8NDY8 209 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 UCN3Q969E3 161 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 NACC2Q96BF6 587 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 TM4SF18Q96CE8 201 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 THOC1Q96FV9 657 aaKnown RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 METTL2AQ96IZ6 378 aaKnown RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 PPP3R2Q96LZ3 170 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 CSF3RQ99062 836 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 SPSB2Q99619 263 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 SLC25A23Q9BV35 468 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 EBPLQ9BY08 206 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 RBCK1Q9BYM8 510 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 LANCL2Q9NS86 450 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 MCM8Q9UJA3 840 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 POLR3HQ9Y535 204 aaPredicted RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 SCN2AQ99250 2005 aa17.53■□□□□ 0.4
PNKP-224ENST00000631020 SPENQ96T58 3664 aaKnown RBP17.53■□□□□ 0.4
PNKP-224ENST00000631020 GOLGA8QA0A0J9YX86 632 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 A0A1W2PR48 441 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 GOLGA8OA6NCC3 632 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 GOLGA8NF8WBI6 632 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 K7EM74 188 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 PROM1O43490 865 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 PCDH7O60245 1069 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 IGHEP01854 428 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 HNRNPFP52597 415 aaKnown RBP17.52■□□□□ 0.4
PNKP-224ENST00000631020 MAPK12P53778 367 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 RAB38P57729 211 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 RPL38P63173 70 aaKnown RBP17.52■□□□□ 0.4
PNKP-224ENST00000631020 OCA2Q04671 838 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 CPZQ66K79 652 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 C18orf63Q68DL7 685 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 CGB2Q6NT52 195 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 HPS6Q86YV9 775 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 PRSS58Q8IYP2 241 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 OR2Y1Q8NGV0 311 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 RFWD2Q8NHY2 731 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 TBC1D20Q96BZ9 403 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 MIEF2Q96C03 454 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 MAELQ96JY0 434 aaKnown RBP17.52■□□□□ 0.4
PNKP-224ENST00000631020 SOX17Q9H6I2 414 aaPredicted RBP17.52■□□□□ 0.4
PNKP-224ENST00000631020 WDR54Q9H977 334 aa17.52■□□□□ 0.4
PNKP-224ENST00000631020 TEX10Q9NXF1 929 aaPredicted RBP17.52■□□□□ 0.4
PNKP-224ENST00000631020 ARHGAP10A1A4S6 786 aa17.52■□□□□ 0.39
PNKP-224ENST00000631020 WASHC1A8K0Z3 465 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms