RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SAP18O00422 153 aaKnown RBP20.85■□□□□ 0.93
SF1-220ENST00000626028 COX7A2P14406 83 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 BSGP35613 385 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 TNFRSF17Q02223 184 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 OR1C1Q15619 314 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 MRM1Q6IN84 353 aaKnown RBP20.85■□□□□ 0.93
SF1-220ENST00000626028 GSPT2Q8IYD1 628 aaKnown RBP20.85■□□□□ 0.93
SF1-220ENST00000626028 AMER2Q8N7J2 671 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 OR4F6Q8NGB9 312 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 NR4A3Q92570 626 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 CDK15Q96Q40 435 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 PELOQ9BRX2 385 aaKnown RBP20.85■□□□□ 0.93
SF1-220ENST00000626028 RPF2Q9H7B2 306 aaKnown RBP20.85■□□□□ 0.93
SF1-220ENST00000626028 WDR41Q9HAD4 459 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 NMRK1Q9NWW6 199 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 TRPS1Q9UHF7 1281 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 FBXW2Q9UKT8 454 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 DIDO1Q9BTC0 2240 aaKnown RBP20.84■□□□□ 0.93
SF1-220ENST00000626028 TRBV11-1A0A0K0K1C0 115 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 PROM1O43490 865 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 CDH16O75309 829 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 ZFAND5O76080 213 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 MLYCDO95822 493 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 F10P00742 488 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 IFNA16P05015 189 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 PYGBP11216 843 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 IMPDH1P20839 514 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 TPP2P29144 1249 aaPredicted RBP20.84■□□□□ 0.93
SF1-220ENST00000626028 HSD17B3P37058 310 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 CYB561P49447 251 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 ZNF678Q5SXM1 525 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 CYP20A1Q6UW02 462 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 PAGE2Q7Z2X7 111 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 CLNKQ7Z7G1 428 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 RNF175Q8N4F7 328 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 PRR7Q8TB68 274 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 ANKRD9Q96BM1 317 aaPredicted RBP20.84■□□□□ 0.93
SF1-220ENST00000626028 L3HYPDHQ96EM0 354 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 C5orf34Q96MH7 638 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 TAAR6Q96RI8 345 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 ELOVL6Q9H5J4 265 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 LRFN1Q9P244 771 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 TBK1Q9UHD2 729 aa20.84■□□□□ 0.93
SF1-220ENST00000626028 DYRK3O43781 588 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 ZNF500O60304 480 aaPredicted RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 GLRA3O75311 464 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 SH3BGRLO75368 114 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 NEURL1O76050 574 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 AGFG2O95081 481 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 DDAH2O95865 285 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 FAM58BPP0C7Q3 252 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 HSD3B1P14060 373 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 HSD3B2P26439 372 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 HLCSP50747 726 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 NEK2P51955 445 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 PRKAA2P54646 552 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 OC90Q02509 493 aaPredicted RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 CLCQ05315 142 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 EIF2S3LQ2VIR3 472 aaKnown RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 GPALPP1Q8IXQ4 340 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 FAM98AQ8NCA5 519 aaKnown RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 TRPC4APQ8TEL6 797 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 PTPMT1Q8WUK0 201 aaPredicted RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 NCLNQ969V3 563 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 SIGLEC12Q96PQ1 595 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 ZNF382Q96SR6 550 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 ANKZF1Q9H8Y5 726 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 YARS2Q9Y2Z4 477 aaKnown RBP20.83■□□□□ 0.93
SF1-220ENST00000626028 ATG4BQ9Y4P1 393 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 ASB4Q9Y574 426 aa20.83■□□□□ 0.93
SF1-220ENST00000626028 GTF3C1Q12789 2109 aa20.83■□□□□ 0.92
SF1-220ENST00000626028 ICE1Q9Y2F5 2266 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 MAN1A2O60476 641 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 DLX3O60479 287 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 LDB3O75112 727 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 SUPT7LO94864 414 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 ETHE1O95571 254 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 STT3AP46977 705 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 CCT5P48643 541 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 HNRNPH2P55795 449 aaKnown RBP20.82■□□□□ 0.92
SF1-220ENST00000626028 PLIN5Q00G26 463 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 CCDC153Q494R4 210 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 LETMD1Q6P1Q0 360 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 HSDL2Q6YN16 418 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 SH2D5Q6ZV89 423 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 TMEM125Q96AQ2 219 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 RBM18Q96H35 190 aaKnown RBP20.82■□□□□ 0.92
SF1-220ENST00000626028 ART5Q96L15 291 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 COPS7AQ9UBW8 275 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 GRID1Q9ULK0 1009 aa20.82■□□□□ 0.92
SF1-220ENST00000626028 ASPDHA6ND91 283 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 C17orf105B2RV13 164 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 H3BQF6 201 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 GOLGA8RI6L899 631 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 FGF17O60258 216 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 GUCY1B2O75343 617 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 EEDO75530 441 aaKnown RBP20.81■□□□□ 0.92
SF1-220ENST00000626028 KRT6AP02538 564 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 KRT6BP04259 564 aa20.81■□□□□ 0.92
SF1-220ENST00000626028 SHBGP04278 402 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms