RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TMEM132CQ8N3T6 1108 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 PRELID2Q8N945 189 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 PPHLN1Q8NEY8 458 aaKnown RBP12.69□□□□□ -0.38
SNX1-214ENST00000625244 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
SNX1-214ENST00000625244 PEX13Q92968 403 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 ALKBH8Q96BT7 664 aaKnown RBP12.69□□□□□ -0.38
SNX1-214ENST00000625244 INTS12Q96CB8 462 aaKnown RBP12.69□□□□□ -0.38
SNX1-214ENST00000625244 SMIM10Q96HG1 83 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 UGT2B28Q9BY64 529 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 OSBPL8Q9BZF1 889 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 OR8D2Q9GZM6 311 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 PRTFDC1Q9NRG1 225 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 HOMER3Q9NSC5 361 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
SNX1-214ENST00000625244 CRYL1Q9Y2S2 319 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
SNX1-214ENST00000625244 H3BMM5 538 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ZBTB14O43829 449 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 TJP3O95049 919 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ACSL3O95573 720 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 C1QAP02745 245 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ESR1P03372 595 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 NPPBP16860 134 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 CLCN7P51798 805 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ASPHQ12797 758 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ELAVL1Q15717 326 aaKnown RBP12.68□□□□□ -0.38
SNX1-214ENST00000625244 PIGGQ5H8A4 983 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 AADACL2Q6P093 401 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 LYPD8Q6UX82 237 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 MBOAT1Q6ZNC8 495 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 CLNKQ7Z7G1 428 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 OTUD6BQ8N6M0 293 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 OR4K1Q8NGD4 311 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 ANKRD9Q96BM1 317 aaPredicted RBP12.68□□□□□ -0.38
SNX1-214ENST00000625244 HES6Q96HZ4 224 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 BEX2Q9BXY8 128 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 AICDAQ9GZX7 198 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 TREX1Q9NSU2 369 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 EFR3BQ9Y2G0 817 aa12.68□□□□□ -0.38
SNX1-214ENST00000625244 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 E5RI56 91 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 GOLGA8TH3BQL2 631 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 GPRIN2O60269 458 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 RCBTB2O95199 551 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 IFNA16P05015 189 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 CCKARP32238 428 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 THBS2P35442 1172 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 CCR8P51685 355 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 HSD17B7P56937 341 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 NAE1Q13564 534 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 RUNX2Q13950 521 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 PHKG1Q16816 387 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 UBE2R2Q712K3 238 aaPredicted RBP12.67□□□□□ -0.38
SNX1-214ENST00000625244 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 STRA8Q7Z7C7 330 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 MORN4Q8NDC4 146 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 ABHD11Q8NFV4 315 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 OR10G3Q8NGC4 313 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 OR5L2Q8NGL0 311 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 OR8K3Q8NH51 312 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 DAZLQ92904 295 aaKnown RBP12.67□□□□□ -0.38
SNX1-214ENST00000625244 ZC3HAV1LQ96H79 300 aaKnown RBP12.67□□□□□ -0.38
SNX1-214ENST00000625244 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 PSD3Q9NYI0 1048 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 ZFP69BQ9UJL9 534 aa12.67□□□□□ -0.38
SNX1-214ENST00000625244 CHCHD2Q9Y6H1 151 aaPredicted RBP12.67□□□□□ -0.38
SNX1-214ENST00000625244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX1-214ENST00000625244 PRKDCP78527 4128 aaKnown RBP12.66□□□□□ -0.38
SNX1-214ENST00000625244 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 TMCC2O75069 709 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
SNX1-214ENST00000625244 HPNP05981 417 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 MPC1LP0DKB6 136 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 ARNTP27540 789 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 PTPN7P35236 360 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 SCTRP47872 440 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 CDK9P50750 372 aaKnown RBP12.66□□□□□ -0.38
SNX1-214ENST00000625244 DIO3P55073 304 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 CRADDP78560 199 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 RCAN2Q14206 197 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 BBS9Q3SYG4 887 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 EIPR1Q53HC9 387 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 LCTLQ6UWM7 567 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 BTLAQ7Z6A9 289 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 FAM47BQ8NA70 645 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 ALG3Q92685 438 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 SPACA9Q96E40 222 aaPredicted RBP12.66□□□□□ -0.38
SNX1-214ENST00000625244 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
SNX1-214ENST00000625244 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms