RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 RELTQ969Z4 430 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 RBM18Q96H35 190 aaKnown RBP12.18□□□□□ -0.46
ATRX-208ENST00000622960 MAPKAP1Q9BPZ7 522 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 FUT8Q9BYC5 575 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 OR8D2Q9GZM6 311 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 TSPAN10Q9H1Z9 355 aaPredicted RBP12.18□□□□□ -0.46
ATRX-208ENST00000622960 XPR1Q9UBH6 696 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 VTI1BQ9UEU0 232 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 DMGDHQ9UI17 866 aaKnown RBP12.18□□□□□ -0.46
ATRX-208ENST00000622960 ZNF180Q9UJW8 692 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 NPIPA1Q9UND3 350 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 PPIEQ9UNP9 301 aaKnown RBP12.18□□□□□ -0.46
ATRX-208ENST00000622960 TSC22D4Q9Y3Q8 395 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 CNTRLQ7Z7A1 2325 aa12.18□□□□□ -0.46
ATRX-208ENST00000622960 TRIM49D1C9J1S8 452 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 KLK8O60259 260 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 OR10H2O60403 315 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 TAC1P20366 129 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 MEOX1P50221 254 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 SMSP52788 366 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 RPS13P62277 151 aaKnown RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 TNFRSF17Q02223 184 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 IFT88Q13099 833 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 ZNF793Q6ZN11 406 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 GPR180Q86V85 440 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 SLC34A3Q8N130 599 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 ARMC10Q8N2F6 343 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 ZCCHC7Q8N3Z6 543 aaKnown RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 CPSF7Q8N684 471 aaKnown RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 MTBPQ96DY7 904 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 PHF21BQ96EK2 531 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 SERPINI1Q99574 410 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 RPF2Q9H7B2 306 aaKnown RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 TRIM45Q9H8W5 580 aaPredicted RBP12.17□□□□□ -0.46
ATRX-208ENST00000622960 AHSPQ9NZD4 102 aa12.17□□□□□ -0.46
ATRX-208ENST00000622960 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 HMX2A2RU54 273 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 PRSS44E7EML9 344 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 PLPP1O14494 284 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 STX16O14662 325 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 PRRG2O14669 202 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 ASNA1O43681 348 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 OR2J2O76002 312 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 TBX6O95947 436 aaPredicted RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 SNRPAP09012 282 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 NR2F6P10588 404 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 STT3AP46977 705 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 PLGLB1Q02325 96 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 CUL3Q13618 768 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 ZNF468Q5VIY5 522 aaPredicted RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 PAOXQ6QHF9 649 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 OPN5Q6U736 354 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 PAGE2Q7Z2X7 111 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 OR8K3Q8NH51 312 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 UHMK1Q8TAS1 419 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 SLC22A8Q8TCC7 542 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 SLC2A12Q8TD20 617 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 ISL2Q96A47 359 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 MRPL57Q9BQC6 102 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 ELOVL6Q9H5J4 265 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 NOL11Q9H8H0 719 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 KCMF1Q9P0J7 381 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 MYOTQ9UBF9 498 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 SPTBN1Q01082 2364 aaKnown RBP12.16□□□□□ -0.46
ATRX-208ENST00000622960 HIVEP3Q5T1R4 2406 aa12.16□□□□□ -0.46
ATRX-208ENST00000622960 IQANK1A0A1B0GTG1 560 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 TGFBR3LH3BV60 316 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 WWP2O00308 870 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 FOXE1O00358 373 aaPredicted RBP12.15□□□□□ -0.46
ATRX-208ENST00000622960 PEX1O43933 1283 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATRX-208ENST00000622960 GUCY1B2O75343 617 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 SEMA3DO95025 777 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
ATRX-208ENST00000622960 OTCP00480 354 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 ABHD2P08910 425 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 ALOX15P16050 662 aaPredicted RBP12.15□□□□□ -0.46
ATRX-208ENST00000622960 MAGEA12P43365 314 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 GPR143P51810 404 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 RNF4P78317 190 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 ID2Q02363 134 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 HIST2H2BCQ6DN03 193 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 IL20RBQ6UXL0 311 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 RTL4Q6ZR62 310 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 GK5Q6ZS86 529 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 TRMT10CQ7L0Y3 403 aaKnown RBP12.15□□□□□ -0.46
ATRX-208ENST00000622960 SLC29A4Q7RTT9 530 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 UBE3DQ7Z6J8 389 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 LCA5Q86VQ0 697 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 SPPL2CQ8IUH8 684 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 ZNF808Q8N4W9 903 aaPredicted RBP12.15□□□□□ -0.46
ATRX-208ENST00000622960 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 CCDC120Q96HB5 630 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms