RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 COX20Q5RI15 118 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 INTS11Q5TA45 600 aaKnown RBP17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 OR4C11Q6IEV9 310 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 PAQR7Q86WK9 346 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 FAM47BQ8NA70 645 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 SLC37A2Q8TED4 501 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 FAM162AQ96A26 154 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 MS4A6EQ96DS6 147 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 MTERF3Q96E29 417 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 NTN4Q9HB63 628 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 CPNE7Q9UBL6 633 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 ACSL6Q9UKU0 697 aa17.54■□□□□ 0.4
PCDHB2-202ENST00000622947 SERPINA1P01009 418 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 POLR2CP19387 275 aaPredicted RBP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 DDCP20711 480 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 OXA1LQ15070 435 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 PLCL1Q15111 1095 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 GPR107Q5VW38 600 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 NCLNQ969V3 563 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 KLHDC7BQ96G42 594 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 MROQ9BYG7 248 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 TMEM9Q9P0T7 183 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 OAZ3Q9UMX2 235 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 RBMX2Q9Y388 322 aaKnown RBP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 SNX11Q9Y5W9 270 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 OR6C74A6NCV1 312 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 UPK1AO00322 258 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 PLOD2O00469 737 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 DLGAP1O14490 977 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 RETP07949 1114 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 GRK3P35626 688 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 COL9A2Q14055 689 aaPredicted RBP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 RGNQ15493 299 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 ATP6AP1Q15904 470 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 VMACQ2NL98 169 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 CPZQ66K79 652 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 PAGE2Q7Z2X7 111 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 VN1R4Q7Z5H5 301 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 TAF8Q7Z7C8 310 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 TTLQ8NG68 377 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 MAL2Q969L2 176 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 MIEF1Q9NQG6 463 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 PRDM7Q9NQW5 492 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 APOBEC3BQ9UH17 382 aaKnown RBP17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 VPS4AQ9UN37 437 aa17.53■□□□□ 0.4
PCDHB2-202ENST00000622947 METTL12A8MUP2 240 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 GMNNO75496 209 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 PRKRAO75569 313 aaKnown RBP17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 RAP2AP10114 183 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 UGT2B7P16662 529 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 MAGP20916 626 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 AHRP35869 848 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 ALDH9A1P49189 494 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 FBXO42Q6P3S6 717 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 SPRED1Q7Z699 444 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 ZNF761Q86XN6 746 aaPredicted RBP17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 ADHFE1Q8IWW8 467 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 CBR4Q8N4T8 237 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 PACRGLQ8N7B6 248 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 MFSD9Q8NBP5 474 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 OR10G6Q8NH81 332 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 OR5AK3PQ8NH89 298 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 LRRC61Q9BV99 259 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 GSDMCQ9BYG8 508 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 KLHL25Q9H0H3 589 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 CHRDQ9H2X0 955 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 DAPK2Q9UIK4 370 aa17.52■□□□□ 0.4
PCDHB2-202ENST00000622947 A0A1W2PRB8 838 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 TRIM64A6NGJ6 449 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 ERI3O43414 337 aaKnown RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 CTSVO60911 334 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 NOL3O60936 208 aaKnown RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 RCVRNP35243 200 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 RPL3P39023 403 aaKnown RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 LSSP48449 732 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 CRYBA2P53672 197 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 ABHD17CQ6PCB6 329 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 TTC33Q6PID6 262 aaPredicted RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 IGFN1Q86VF2 1251 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 PARGQ86W56 976 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 TRIM48Q8IWZ4 208 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 MINDY2Q8NBR6 621 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 OR8K5Q8NH50 307 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 HPS1Q92902 700 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 TBC1D17Q9HA65 648 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 EVA1BQ9NVM1 165 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 TAS2R9Q9NYW1 312 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 ZNF282Q9UDV7 671 aaPredicted RBP17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 ADAM29Q9UKF5 820 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 SNX7Q9UNH6 387 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 VPS13AQ96RL7 3174 aa17.52■□□□□ 0.39
PCDHB2-202ENST00000622947 A0A1W2PR77 199 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 CCNDBP1O95273 360 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 VIPP01282 170 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms