RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZNF385DQ9H6B1 395 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 CTSFQ9UBX1 484 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 PCDHA9Q9Y5H5 950 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 NBEAQ8NFP9 2946 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 LOC101059948A0A1B0GTJ6 334 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 C1orf226A1L170 272 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 VSTM2BA6NLU5 285 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 C9J4A7 227 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 NDUFAB1O14561 156 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 PRMT3O60678 531 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 BMP10O95393 424 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 FHP07954 510 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 NR2F6P10588 404 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 STAT5AP42229 794 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 TMPRSS3P57727 454 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 RPS6KA2Q15349 733 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 C18orf63Q68DL7 685 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM199XQ6PEV8 388 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 RIPOR1Q6ZS17 1223 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 ZC3H7AQ8IWR0 971 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 CLHC1Q8NHS4 586 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 YIPF2Q9BWQ6 316 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM117AQ9C073 453 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 WDR54Q9H977 334 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 WDR41Q9HAD4 459 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 CPNE5Q9HCH3 593 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 MRGBPQ9NV56 204 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 C14orf105Q9NVL8 296 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 EHD3Q9NZN3 535 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 HEY2Q9UBP5 337 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 G3BP2Q9UN86 482 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 MAPRE3Q9UPY8 281 aa18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 EXO1Q9UQ84 846 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 MRPS33Q9Y291 106 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 COPG1Q9Y678 874 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM227AF5H4B4 570 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 EFSO43281 561 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 LIFP15018 202 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 NCF2P19878 526 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 DDCP20711 480 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 PRPS1L1P21108 318 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 UCNP55089 124 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 STX1BP61266 288 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 OCA2Q04671 838 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 C2orf80Q0P641 193 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 NCF4Q15080 339 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 NKG7Q16617 165 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 COL28A1Q2UY09 1125 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 CCDC81Q6ZN84 652 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 RIMKLAQ8IXN7 391 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 ZNF595Q8IYB9 648 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 MIER2Q8N344 545 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 ANKS4BQ8N8V4 417 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM47BQ8NA70 645 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 CDC26Q8NHZ8 85 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 STT3BQ8TCJ2 826 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 ZNF764Q96H86 408 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 CRELD1Q96HD1 420 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 RPF2Q9H7B2 306 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 LANCL2Q9NS86 450 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 ZIM2Q9NZV7 527 aa18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 NXT1Q9UKK6 140 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-221ENST00000622702 CD63P08962 238 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 RAB40ALP0C0E4 278 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 JAK1P23458 1154 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 MC1RQ01726 317 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 PDE7AQ13946 482 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 SQLEQ14534 574 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 VWA2Q5GFL6 755 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 MLIPQ5VWP3 458 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 MMP21Q8N119 569 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 CPSF7Q8N684 471 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 TMEM52Q8NDY8 209 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 STARD8Q92502 1023 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 KIAA1143Q96AT1 154 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 MTERF3Q96E29 417 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 DPY30Q9C005 99 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 REEP4Q9H6H4 257 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 GPN2Q9H9Y4 310 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 SAR1AQ9NR31 198 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 TMEM45AQ9NWC5 275 aa18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 GPN3Q9UHW5 284 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-221ENST00000622702 TBX19O60806 448 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CCDC22O60826 627 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CNOT3O75175 753 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 JRKO75564 520 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 PRKRAO75569 313 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 LRATO95237 230 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 FURINP09958 794 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 ZGLP1P0C6A0 271 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 ATXN8OSP0DMR3 200 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TCN2P20062 427 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 GPX3P22352 226 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 DLSTP36957 453 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 HPCAL1P37235 193 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 RPL3P39023 403 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 HNRNPFP52597 415 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 UFM1P61960 85 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CXADRP78310 365 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CBX1P83916 185 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms