RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CLDN9O95484 217 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 PDYNP01213 254 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 EPORP19235 508 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 S100A3P33764 101 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 LIPAP38571 399 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CDKN2CP42773 168 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 P2RY4P51582 365 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CAPZA1P52907 286 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 AP1S1P61966 158 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 BCL2L1Q07817 233 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CDH18Q13634 790 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 EXOSC2Q13868 293 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 DSG2Q14126 1118 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 ATG9BQ674R7 924 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 MACC1Q6ZN28 852 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 USP45Q70EL2 814 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 GALNT5Q7Z7M9 940 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TSPAN33Q86UF1 283 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CALHM3Q86XJ0 350 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TRIM43Q96BQ3 446 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 ALG14Q96F25 216 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TSSK3Q96PN8 268 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CPPED1Q9BRF8 314 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 COPS4Q9BT78 406 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 VNN3Q9NY84 501 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 KCMF1Q9P0J7 381 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TMEFF2Q9UIK5 374 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TRBC1P01850 177 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 C1QCP02747 245 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CHRM5P08912 532 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 SELPP16109 830 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TACR1P25103 407 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 NRIP1P48552 1158 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 STARP49675 285 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 GZMMP51124 257 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CYP4F8P98187 520 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 CDKN3Q16667 212 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 ZC3H12BQ5HYM0 836 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 ZNF783Q6ZMS7 281 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 OVCH2Q7RTZ1 564 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 GTF3AQ92664 365 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 PYURFQ96I23 114 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 BARD1Q99728 777 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 PAPOLGQ9BWT3 736 aaKnown RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 AASSQ9UDR5 926 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 MGAT4BQ9UQ53 548 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TRBV5-4A0A0C4DH59 114 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 FAM220BPB1ANY3 271 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 TPOP07202 933 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 HEXBP07686 556 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 ACAA1P09110 424 aaPredicted RBP11.9□□□□□ -0.5
LITAF-221ENST00000622633 TRHRP34981 398 aaPredicted RBP11.9□□□□□ -0.5
LITAF-221ENST00000622633 PUDPQ08623 228 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 TOR1AIP1Q5JTV8 583 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 ZNF691Q5VV52 312 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 OR5T2Q8NGG2 359 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 SVIPQ8NHG7 77 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 UBTD2Q8WUN7 234 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 SELENOMQ8WWX9 145 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 ASB15Q8WXK1 588 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 RBM18Q96H35 190 aaKnown RBP11.9□□□□□ -0.5
LITAF-221ENST00000622633 SORCS2Q96PQ0 1159 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 C19orf43Q9BQ61 176 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 KCNH6Q9H252 994 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 ARL15Q9NXU5 204 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 PLXNA4Q9HCM2 1894 aa11.9□□□□□ -0.5
LITAF-221ENST00000622633 A0A096LPI6 279 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
LITAF-221ENST00000622633 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 hCG_1807616A0A1W2PRN6 198 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 ERN1O75460 977 aaKnown RBP11.89□□□□□ -0.51
LITAF-221ENST00000622633 SYN1P17600 705 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 GSTM5P46439 218 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 KCNJ5P48544 419 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 RPIAP49247 311 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 CLDN8P56748 225 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 ZXDBP98169 803 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 HOXC5Q00444 222 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 IL5RAQ01344 420 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 TOMM20Q15388 145 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 ZXDCQ2QGD7 858 aaPredicted RBP11.89□□□□□ -0.51
LITAF-221ENST00000622633 KLHL12Q53G59 568 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 CARD16Q5EG05 197 aa11.89□□□□□ -0.51
LITAF-221ENST00000622633 ZNF551Q7Z340 670 aaPredicted RBP11.89□□□□□ -0.51
LITAF-221ENST00000622633 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms