RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TRIM46Q7Z4K8 759 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 AMER2Q8N7J2 671 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 CHTF18Q8WVB6 975 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 C5AR2Q9P296 337 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 ZNF451Q9Y4E5 1061 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 A0A1W2PR48 441 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 SAGE2PA6NJ88 616 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 LDB3O75112 727 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 PRKRAO75569 313 aaKnown RBP17.12■□□□□ 0.33
LITAF-220ENST00000620789 C1QL1O75973 258 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 AIFM1O95831 613 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 FGF4P08620 206 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 NR2F6P10588 404 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 ARRB2P32121 409 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 MAPK12P53778 367 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 SLC18A1P54219 525 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 SLC26A5P58743 744 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 STX4Q12846 297 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 NFATC3Q12968 1075 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 SPIN4Q56A73 249 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 AGAP7PQ5VUJ5 663 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 JMJD6Q6NYC1 403 aaPredicted RBP17.12■□□□□ 0.33
LITAF-220ENST00000620789 HOMEZQ8IX15 550 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 ANKRD42Q8N9B4 389 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 PPP1R14CQ8TAE6 165 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 M1APQ8TC57 530 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 TANKQ92844 425 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 AGAP4Q96P64 663 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 VIPAS39Q9H9C1 493 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 WDR41Q9HAD4 459 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 TEX10Q9NXF1 929 aaPredicted RBP17.12■□□□□ 0.33
LITAF-220ENST00000620789 FIS1Q9Y3D6 152 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 DOCK10Q96BY6 2186 aa17.12■□□□□ 0.33
LITAF-220ENST00000620789 TNRC6AQ8NDV7 1962 aaKnown RBP17.11■□□□□ 0.33
LITAF-220ENST00000620789 A8MUA0 341 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 FGF17O60258 216 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 CHEK2O96017 543 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 SERPINE1P05121 402 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ITGAMP11215 1152 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 PPP2R1BP30154 601 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 IGLV3-21P80748 117 aaPredicted RBP17.11■□□□□ 0.33
LITAF-220ENST00000620789 ACSM2AQ08AH3 577 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 SERTAD2Q14140 314 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 TERF2Q15554 542 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 IMPG1Q17R60 797 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ACSM2BQ68CK6 577 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 HPS6Q86YV9 775 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ZNF843Q8N446 348 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
LITAF-220ENST00000620789 PSMF1Q92530 271 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ANKRD9Q96BM1 317 aaPredicted RBP17.11■□□□□ 0.33
LITAF-220ENST00000620789 ARL8AQ96BM9 186 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 APIPQ96GX9 242 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ALOXE3Q9BYJ1 711 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 MMP25Q9NPA2 562 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 ADAP2Q9NPF8 381 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 PNO1Q9NRX1 252 aaKnown RBP17.11■□□□□ 0.33
LITAF-220ENST00000620789 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 TRAF6Q9Y4K3 522 aa17.11■□□□□ 0.33
LITAF-220ENST00000620789 SPTA1P02549 2419 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 TMEM233B4DJY2 109 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 GUCY1B2O75343 617 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 RSL1D1O76021 490 aaKnown RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 MYO1DO94832 1006 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 TRA2BP62995 288 aaKnown RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 RAE1P78406 368 aaKnown RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 ID2Q02363 134 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 FOLH1Q04609 750 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 ELAVL1Q15717 326 aaKnown RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 CRB2Q5IJ48 1285 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 SH2D4BQ5SQS7 431 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 NDUFAF5Q5TEU4 345 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 HHATQ5VTY9 493 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 GALNT18Q6P9A2 607 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 OR4N5Q8IXE1 308 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 CLYBLQ8N0X4 340 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 SIRT6Q8N6T7 355 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 PAIP2Q9BPZ3 127 aaKnown RBP17.1■□□□□ 0.33
LITAF-220ENST00000620789 SIRT5Q9NXA8 310 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 VTI1BQ9UEU0 232 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
LITAF-220ENST00000620789 MYOCOSA0A1B0GUC4 107 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 GLOD5A6NK44 160 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 SLC28A1O00337 649 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 PCDH7O60245 1069 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 DPM1O60762 260 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 HSPA4LO95757 839 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 IFNA16P05015 189 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 NEFHP12036 1026 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 GRK2P25098 689 aa17.09■□□□□ 0.33
LITAF-220ENST00000620789 TIA1P31483 386 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms