RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FZD5Q13467 585 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 BIRC2Q13490 618 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 C6orf120Q7Z4R8 191 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 PJA1Q8NG27 643 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC37A2Q8TED4 501 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 HLA-CQ95604 372 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TBC1D20Q96BZ9 403 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 MUS81Q96NY9 551 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 AMBRA1Q9C0C7 1298 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 EHD3Q9NZN3 535 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 IFT80Q9P2H3 777 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 THEGQ9P2T0 379 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TMEFF2Q9UIK5 374 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 PCDHGA2Q9Y5H1 932 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 M0QX08 132 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 ERAL1O75616 437 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 AIFM1O95831 613 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 PIGAP37287 484 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 ITGA1P56199 1179 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 UBE2IP63279 158 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 BTN3A2P78410 334 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 FCRL6Q6DN72 434 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 PTCRAQ6ISU1 281 aaPredicted RBP16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 CCDC80Q76M96 950 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 PIWIL3Q7Z3Z3 882 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 ASPGQ86U10 573 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 ARL10Q8N8L6 244 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 SRFBP1Q8NEF9 429 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 SPPL2AQ8TCT8 520 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 RDH12Q96NR8 316 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 POT1Q9NUX5 634 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 FAM118AQ9NWS6 357 aa16.43■□□□□ 0.22
PCDHGC3-205ENST00000617641 KRBA1A5PL33 1030 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR6B1O95007 311 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF888P0CJ79 500 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 CTSEP14091 401 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 CCT3P49368 545 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 TP53BP2Q13625 1128 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 COL9A2Q14055 689 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 NADK2Q4G0N4 442 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 CYP27C1Q4G0S4 372 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 FIGLAQ6QHK4 219 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 TSEN54Q7Z6J9 526 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF761Q86XN6 746 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 KLHDC7BQ96G42 594 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 BBS4Q96RK4 519 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 ANGPT4Q9Y264 503 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 SAMHD1Q9Y3Z3 626 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 TDRD6O60522 2096 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 A0A0J9YVX5 310 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 TNFSF14O43557 240 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 SH3BP5O60239 455 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 PRAMEF10O60809 474 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 IL9P15248 144 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 DNAJA1P31689 397 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 GPC1P35052 558 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 NCBP2P52298 156 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 ARFIP1P53367 373 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 PCBP3P57721 371 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 RGS1Q08116 209 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 KCNAB2Q13303 367 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 MLC1Q15049 377 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 SZRD1Q7Z422 152 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 DCP2Q8IU60 420 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 PSMA8Q8TAA3 256 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 RAB8BQ92930 207 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 MAPKAP1Q9BPZ7 522 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 RAB23Q9ULC3 237 aa16.42■□□□□ 0.22
PCDHGC3-205ENST00000617641 A0A1W2PS29 197 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 P2RX6O15547 441 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 MITFO75030 526 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF217O75362 1048 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 ALPPL2P10696 532 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PVRP15151 417 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 FPR1P21462 350 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 CALRP27797 417 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 NTSP30990 170 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR1E2P47887 323 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 LSSP48449 732 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 DUSP2Q05923 314 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 KCTD21Q4G0X4 260 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 CRB2Q5IJ48 1285 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 RPS26P11Q5JNZ5 115 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 SMYD1Q8NB12 490 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 NT5CQ8TCD5 201 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 GAL3ST3Q96A11 431 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR2A5Q96R48 311 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 GABARAPL1Q9H0R8 117 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 EVA1BQ9NVM1 165 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PADI2Q9Y2J8 665 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 SCN3AQ9NY46 2000 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 KIR2DS5A0A0G2JLQ3 304 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 A0A0G2JNG1 304 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms