RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ZNF778Q96MU6 729 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 AGAP4Q96P64 663 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 SORT1Q99523 831 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 HDHD5Q9BXW7 423 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 SYT4Q9H2B2 425 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 RIMS3Q9UJD0 308 aa10.25□□□□□ -0.77
CLTCL1-209ENST00000617103 RIMS1Q86UR5 1692 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TEX13CA0A0J9YWL9 993 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 NDUFS4O43181 175 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ADAP00813 363 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 FDXRP22570 491 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 SOX2P48431 317 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CDKN2DP55273 166 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 EIF4HQ15056 248 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ZMYND11Q15326 602 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ALG1LQ6GMV1 187 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 PRSS55Q6UWB4 352 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 GALNT7Q86SF2 657 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 BEST3Q8N1M1 668 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 KCNN1Q92952 543 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 PMEPA1Q969W9 287 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 COQ10AQ96MF6 247 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 RGCCQ9H4X1 137 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 A0A1B0GVI7 797 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 A0A1B0GVT2 93 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CD8B2A6NJW9 211 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CCL16O15467 120 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 FMO6PO60774 539 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 PAK4O96013 591 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CD8BP10966 210 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TIA1P31483 386 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 VIPR1P32241 457 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 RBMXP38159 391 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 KEAP1Q14145 624 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 RCAN2Q14206 197 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MAPK14Q16539 360 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 DTWD1Q8N5C7 304 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MS4A15Q8N5U1 240 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 RIT1Q92963 219 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 C1orf74Q96LT6 269 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 DPH2Q9BQC3 489 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 DHRS4Q9BTZ2 278 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ACOT13Q9NPJ3 140 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 OR2S2Q9NQN1 319 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TMEM45AQ9NWC5 275 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 KCNN3Q9UGI6 736 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 LAMP5Q9UJQ1 280 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 COQ9O75208 318 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CSTBP04080 98 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MRPL3P09001 348 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 KCNJ8Q15842 424 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ODF4Q2M2E3 257 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 BCL2L15Q5TBC7 163 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 PPP2R2DQ66LE6 453 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ABHD13Q7L211 337 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 VTCN1Q7Z7D3 282 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ISCA2Q86U28 154 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 KLBQ86Z14 1044 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 DTX3Q8N9I9 347 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 OR8K5Q8NH50 307 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TMEM125Q96AQ2 219 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CHFRQ96EP1 664 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 SLC30A3Q99726 388 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TBL1XR1Q9BZK7 514 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.24□□□□□ -0.772e-7■■■■■ 39
CLTCL1-209ENST00000617103 TCRBV3S1A0A5B6 114 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 E7EQ34 232 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 RGS9O75916 674 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 NDUFS1P28331 727 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TAS1R3Q7RTX0 852 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 SLC5A8Q8N695 610 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 FBXO15Q8NCQ5 510 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 OR52B6Q8NGF0 335 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MFSD8Q8NHS3 518 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MOAP1Q96BY2 351 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 TMEM41AQ96HV5 264 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MKRN2Q9H000 416 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 GPN2Q9H9Y4 310 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 MYH6P13533 1939 aa10.24□□□□□ -0.77
CLTCL1-209ENST00000617103 ZCWPW2A0A1B0GU75 182 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 HMX3A6NHT5 357 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 MMP20O60882 483 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 RFPL3O75679 317 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 BEST1O76090 585 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 ACP5P13686 325 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 HSD11B1P28845 292 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 CHAF1BQ13112 559 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 RPL13AP3Q6NVV1 102 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 CTU1Q7Z7A3 348 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 UMODL1-AS1Q8N2C9 162 aa10.23□□□□□ -0.77
CLTCL1-209ENST00000617103 LILRB4Q8NHJ6 448 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms