RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ACPTQ9BZG2 426 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 ROGDIQ9GZN7 287 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 NSRP1Q9H0G5 558 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 KLHL31Q9H511 634 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 FBXL4Q9UKA2 621 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 PPT2Q9UMR5 302 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 CDC14AQ9UNH5 594 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 DOCK10Q96BY6 2186 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 A0A0G2JN53 185 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 A0A1B0GX78 115 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 SERTM1A2A2V5 107 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 SOCS6O14544 535 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 DSCR3O14972 297 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 ALOX12BO75342 701 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 MYO1DO94832 1006 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 ALOX12P18054 663 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 PER3P56645 1201 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 BTN3A2P78410 334 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 HMGCS1Q01581 520 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 ACSM2AQ08AH3 577 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 UGT3A2Q3SY77 523 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 ACSM2BQ68CK6 577 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 TMEM214Q6NUQ4 689 aaKnown RBP13.99□□□□□ -0.17
UBXN1-218ENST00000616865 NIPAL1Q6NVV3 410 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 PAGE2Q7Z2X7 111 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 TRIM46Q7Z4K8 759 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 LRRC34Q8IZ02 419 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 SLC34A3Q8N130 599 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 UTP15Q8TED0 518 aaKnown RBP13.99□□□□□ -0.17
UBXN1-218ENST00000616865 TUBGCP3Q96CW5 907 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 CHMP6Q96FZ7 201 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 QRFPRQ96P65 431 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 KCNC2Q96PR1 638 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 SPSB2Q99619 263 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 TBCDQ9BTW9 1192 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 NUF2Q9BZD4 464 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 WDR54Q9H977 334 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 FGFR1OP2Q9NVK5 253 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 PTGDR2Q9Y5Y4 395 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 SLC22A7Q9Y694 548 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 USH1CQ9Y6N9 552 aa13.99□□□□□ -0.17
UBXN1-218ENST00000616865 A0A0A6YYC8 382 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 I3L1I5 382 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 LRRTM2O43300 516 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 SEC22BO75396 215 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 KLHL18O94889 574 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 SEMA3DO95025 777 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ONECUT2O95948 504 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ALBP02768 609 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 PIM1P11309 404 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 EDN3P14138 238 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 IL1RNP18510 177 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 LSP1P33241 339 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 HYAL2Q12891 473 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 FAM53BQ14153 422 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ZNF169Q14929 603 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 NKG7Q16617 165 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ADPRMQ3LIE5 342 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 DEFB134Q4QY38 66 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ATP6AP1LQ52LC2 224 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 SPIN4Q56A73 249 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 AGAP7PQ5VUJ5 663 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 IRAK1BP1Q5VVH5 260 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 B3GNTL1Q67FW5 361 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 NXNQ6DKJ4 435 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 OR4C11Q6IEV9 310 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 RNF165Q6ZSG1 346 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 COX15Q7KZN9 410 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 METTL27Q8N6F8 245 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 GRHL3Q8TE85 626 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 MMABQ96EY8 250 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 THOC1Q96FV9 657 aaKnown RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 PPP3R2Q96LZ3 170 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 C10orf90Q96M02 699 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 AGAP4Q96P64 663 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 YIPF2Q9BWQ6 316 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 MRPL1Q9BYD6 325 aaKnown RBP13.98□□□□□ -0.17
UBXN1-218ENST00000616865 SLC26A1Q9H2B4 701 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 TUBB1Q9H4B7 451 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 LRTM1Q9HBL6 345 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 NPHS2Q9NP85 383 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 OSGIN2Q9Y236 505 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 NAALAD2Q9Y3Q0 740 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 HS3ST3B1Q9Y662 390 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 ABCA12Q86UK0 2595 aa13.98□□□□□ -0.17
UBXN1-218ENST00000616865 POLEQ07864 2286 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 ATP6AP2A0A1C7CYW4 349 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 B3GALT2O43825 422 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 PEX11AO75192 247 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 ATP6AP2O75787 350 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 RSL1D1O76021 490 aaKnown RBP13.97□□□□□ -0.17
UBXN1-218ENST00000616865 TGDSO95455 350 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 ETHE1O95571 254 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 FBLP22087 321 aaKnown RBP13.97□□□□□ -0.17
UBXN1-218ENST00000616865 MTTPP55157 894 aa13.97□□□□□ -0.17
UBXN1-218ENST00000616865 ABHD17CQ6PCB6 329 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms