RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NPEPPSL1A6NEC2 478 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 SLC16A5O15375 505 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 PROM1O43490 865 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 MAN1A2O60476 641 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 HNRNPCL1O60812 293 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 CRCPO75575 148 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 CTAG2O75638 210 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 SP1P08047 785 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 ZNF24P17028 368 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 PTGER1P34995 402 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 PIK3CGP48736 1102 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 RASSF2P50749 326 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 AQP5P55064 265 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 TSNQ15631 228 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 PRTGQ2VWP7 1150 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 BTBD16Q32M84 506 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 SPDYAQ5MJ70 313 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 METTL2BQ6P1Q9 378 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 UNC5DQ6UXZ4 953 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 ACAD11Q709F0 780 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 CD163Q86VB7 1156 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 CCDC71Q8IV32 467 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 DCUN1D3Q8IWE4 304 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 FAM98AQ8NCA5 519 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 FAM57AQ8TBR7 257 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 C10orf82Q8WW14 230 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 ATOH8Q96SQ7 321 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 POLDIP3Q9BY77 421 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 MKKSQ9NPJ1 570 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 OARD1Q9Y530 152 aa16.49■□□□□ 0.23
TRAPPC3-209ENST00000616395 CHEK2O96017 543 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 TPOP07202 933 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 SBK3P0C264 359 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 C8orf89P0DMQ9 161 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 DNASE1P24855 282 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 PSMB5P28074 263 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 PTGS2P35354 604 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 GMPRP36959 345 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 MEOX1P50221 254 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 PGGT1BP53609 377 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 OC90Q02509 493 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 GBX1Q14549 363 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 TBCCQ15814 346 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 PFKFB4Q16877 469 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 SYT16Q17RD7 645 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ARL13AQ5H913 290 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ZNF678Q5SXM1 525 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 PLAG1Q6DJT9 500 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM211Q6ICI0 200 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 C6orf89Q6UWU4 347 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 RNF44Q7L0R7 432 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ZC3H7AQ8IWR0 971 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 STON2Q8WXE9 905 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 RND1Q92730 232 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 MMABQ96EY8 250 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 THOC1Q96FV9 657 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ALPK1Q96QP1 1244 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 NPAS2Q99743 824 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 MIPEPQ99797 713 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 EGFL8Q99944 293 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 SLC24A3Q9HC58 644 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 NSD1Q96L73 2696 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC3-209ENST00000616395 UBXN8O00124 270 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 HDAC3O15379 428 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 ITM2AO43736 263 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 LYPLA1O75608 230 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 NEURL1O76050 574 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 C1orf105O95561 183 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 ANXA5P08758 320 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 EZRP15311 586 aaKnown RBP16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 SF3A3Q12874 501 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 OR4D1Q15615 310 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 MEP1AQ16819 746 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 SULT1C3Q6IMI6 304 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 FRMD7Q6ZUT3 714 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 LANCL3Q6ZV70 420 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 RPRMLQ8N4K4 120 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 RFWD2Q8NHY2 731 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 MCOLN3Q8TDD5 553 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 MVB12AQ96EY5 273 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 MARCOQ9UEW3 520 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 HAO1Q9UJM8 370 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 GTF3C1Q12789 2109 aa16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 INTS1Q8N201 2190 aaKnown RBP16.47■□□□□ 0.23
TRAPPC3-209ENST00000616395 VPS13CQ709C8 3753 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 ARHGEF33A8MVX0 844 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 H0YGG7 62 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 CDC7O00311 574 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 KLK8O60259 260 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 FKBP9O95302 570 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 DGKQP52824 942 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 EMP3P54852 163 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 HNRNPH2P55795 449 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms